Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1930 ATGGAACGTCGAAGTAGGTTGGTTTTTGTATCAGATTTTGTTCTATCATTCATGTGGGTATGCTCTGGCGTTCTTGTTCGATTAATTGCCTTCAAAATTCTAGGTTTTTCTCATACTCATCTCGCCGAGATTGTCAAGCTTTCATTTTCCATAGCCAACATGTTCTTGTTTGCTTTCCTTGCCAAGGTTTCTCGCGGTGCCTACAATCCTCTTCCTGTTTTGGTTGATGCTATTACCGGAGATTTTCGTAACTTCTTTCTCTGTGTTGGTTTTAGAGTTCCTGCTCAGGTGGTTGGATTTATTGTCGGAGTAAAACTTGTTATTAGTACTATTCCTGAAGTAGGACGTGGACCACGTTTGAATGTTGACATTCTTCGAGGAGCATTGACAGAAGGATTACTAACATTTGTAGTTGTAAGCATTTCACTTGGGCTTACCACAACCAAAATTCGCAAAAGTTTCTTCATGAAGACTTGGATTTCCAGCCTATCCAAGTTAACACTACATATACTTGGCTCTAATCTAACCGGTGGTTGTATGAACCCCGTTTCTGTAATGGCATGGACGTATGTTCGAGGAGATCACATAACAAAGGAACACATCTTCGTATATTGGGTTGCCCCTATAAAAGCAACTATTCTAGCAGTGTGGACATTCAAATTATTAGTACGACGTATAAAAACAGGCTCCAAAAGTAAATCAGATTGA 708 0.3969 MERRSRLVFVSDFVLSFMWVCSGVLVRLIAFKILGFSHTHLAEIVKLSFSIANMFLFAFLAKVSRGAYNPLPVLVDAITGDFRNFFLCVGFRVPAQVVGFIVGVKLVISTIPEVGRGPRLNVDILRGALTEGLLTFVVVSISLGLTTTKIRKSFFMKTWISSLSKLTLHILGSNLTGGCMNPVSVMAWTYVRGDHITKEHIFVYWVAPIKATILAVWTFKLLVRRIKTGSKSKSD* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1930 235 Pfam Major intrinsic protein 9 218 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa3g1930 235 Gene3D Glycerol uptake facilitator protein. 6 234 IPR023271 -
Psa3g1930 235 PANTHER AQUAPORIN SIP2-1-RELATED 7 231 - -
Psa3g1930 235 PANTHER AQUAPORIN SIP2-1-RELATED 7 231 IPR044226 GO:0015267
Psa3g1930 235 SUPERFAMILY Aquaporin-like 8 225 IPR023271 -
Psa3g1930 235 PRINTS Major intrinsic protein family signature 7 26 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa3g1930 235 PRINTS Major intrinsic protein family signature 49 73 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa3g1930 235 PRINTS Major intrinsic protein family signature 88 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa3g1930 235 PRINTS Major intrinsic protein family signature 130 148 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa3g1930 235 PRINTS Major intrinsic protein family signature 162 184 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa3g1930 235 PRINTS Major intrinsic protein family signature 202 222 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1930 Psa-Chr3 173739915 173741070 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1930 10 235 Major Intrinsic Protein MIP AT3G56950 54.545 7.22e-86 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1930 K09875 - gmx:100786138 333.183