Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1927 ATGGAACTCTTCTTCTCCCTCCAATCATTTCTTATTCCCATTCTCTCGGTTCTCTTCCTCTATCTCTACTTTCATTTCTTCACCATATCAAACAAACCCGGCTTCAAAACCTACCCTTTCGTTGGAGTTTTACCTGAATTCATATCAAATCGCCACCGCTTCCTCCAATGGACCACCCAAGTCCTCCGCGACTGTCCCACCAACACCGCCGTCTTCATTCGCCCCGGAAGAATACACGGCATCATAACAGCCAACCCAGAAAACATACAGCATATTTTAAAAACCAAATTCGAAAACTACCCTAAAGGCGAAAGATTCATCAGTTTCCTCCAAGATTTTCTCGGCAGCGGAATCTTCAACTCAGACGGTGATCTCTGGAAGCTTCAGAGAAAAACTGCCAGCTACGAATTCAACACCAAGTCTCTAAGAAACTTCATCGTTGAAAATGTAACAGTTGAAACGCAAACTAGGCTCATTCCTATTCTCTCAAAAGCAACCGAGAAAAACGAAATCCTTGATTTGCAGGACCTTTTAGAATGTTTCGCATTCGATAACGTTTGCAAACTCGCCTTCAACGTCGACCCTGGTTGTCTCGGCGGTGACGGCACCACCGGAAGCGCCTCCTTCATGCGCGCTTTCGAAGAAGCAGCAGTGTTAAGTTCTGGAAGGTTCATGTCTCTTCTCCCGTTGTTATGGAAAGTGAAAAAGATTCTCAACGTTGGAACAGAGCGGAGATTGAAACAATCAATCGCAACTGTTCATGAATTCGCTGACGAGATCATACGGTCAAGAATGGAAGCGAAAGAGGGTCCCACAAAAGGTGAAGATTTGTTATCACGCTTCATCAGAACTGAAGAAGCTTCGCCGGAGTTTCTCCGTGATATCGTAATAAGCTTTATTCTTGCTGGACGTGATACGACGTCGTCTGCTTTGAGTTGGTTCTTCTGGATCTTATCTTCCAGAACCGACATTAAAGAAAAAATAATCAAAGAAATAGAAACAGTGCGTTCAAGAAGTGAAGATGAAGCGGCATCGTTTGGTTATGAGGAGTTGAAGGAGATGCAATACTTACATGCGGCAATTACGGAGGCAATGAGATTGTACCCGCCAGTGCCGGTTGATACGAAGGCGTGTTTAAACGACGACGTTTTGCCGGACGGGACTAGAATTGCGAAAGGTTGGTTTATTTCTTACCATACTTATGCTATGGGGAGATTGGAGAGTGTGTGGGGGAAGGATTGTAATGAGTTTAAACCTGAGAGGTGGTTAGAAAATGAGAATGATGGTGGTGTTGGTGTTTGTAGAAGTGAGAGTCCGTTTCGGTTTCCGGTGTTTCATGCGGGTCCTAGGATGTGTTTGGGGAAGGAAATGGCGTATATTCAGATGAAGTCAATTGCAGCTTCTGTGATGGAAAGGTTTGAGGTTGTTGCAGAGGAGAAAGACAAGTGTCCTGAACATGTTTTGTCTTTAACTTTGAGGATGAAAGATGGATTGCCTGTGCGTGTGCTAGCAAGGTAA 1518 0.4447 MELFFSLQSFLIPILSVLFLYLYFHFFTISNKPGFKTYPFVGVLPEFISNRHRFLQWTTQVLRDCPTNTAVFIRPGRIHGIITANPENIQHILKTKFENYPKGERFISFLQDFLGSGIFNSDGDLWKLQRKTASYEFNTKSLRNFIVENVTVETQTRLIPILSKATEKNEILDLQDLLECFAFDNVCKLAFNVDPGCLGGDGTTGSASFMRAFEEAAVLSSGRFMSLLPLLWKVKKILNVGTERRLKQSIATVHEFADEIIRSRMEAKEGPTKGEDLLSRFIRTEEASPEFLRDIVISFILAGRDTTSSALSWFFWILSSRTDIKEKIIKEIETVRSRSEDEAASFGYEELKEMQYLHAAITEAMRLYPPVPVDTKACLNDDVLPDGTRIAKGWFISYHTYAMGRLESVWGKDCNEFKPERWLENENDGGVGVCRSESPFRFPVFHAGPRMCLGKEMAYIQMKSIAASVMERFEVVAEEKDKCPEHVLSLTLRMKDGLPVRVLAR* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1927 505 PANTHER CYTOCHROME P450 94B3-LIKE 32 501 - -
Psa3g1927 505 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1927 505 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1927 505 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1927 505 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1927 505 Pfam Cytochrome P450 33 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1927 505 PANTHER CYTOCHROME P450 32 501 - -
Psa3g1927 505 Gene3D Cytochrome P450 18 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1927 505 SUPERFAMILY Cytochrome P450 24 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1927 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Psa3g1927 505 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1927 505 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1927 505 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1927 505 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1927 505 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1927 Psa-Chr3 173520050 173522317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1927 30 505 Cytochrome P450 AT3G56630 60.879 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1927 - - gmx:100812147 739.954