Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1915 ATGGGAAAATCCGAAGAAGAACAACATCTGCCACGTGGCGCTACCTCATCGGATCGACCGCAGAATGCGGAAACAGAGTGTCGGCGCTGTTGTTGTTGTTCTCAGATTCAGAAACTCGTTGGTTTCAGATGCATTCTCGTTTTTCTCTTCTCTCTTGCTTTGTTCCTCTCTGCTTTGTTCTGGTTGCCTCCGTTTCTTCACCTCGCAGATCAGAAGAATCTGCACGATGATTCCAAATATAAAGGTCATGATATTGTTGCAAGCTTTATTGTTCATAAGCCGGTCACTGTGCTAGAAGATTACAAATTGCAGCTCGCACGCGAAATTTTTGATGAGATAGAAGCTCCCTCTACTACAACAGTGAACATCTTGTCTCTAGACCCGTTACCTCGGCCAAACACGACAAAAGTGGTATTTGCAGTCGATCCTGATGGTGGTGAATACTCAGAAGCGTCTTCTCCCGCCATAAGTTTGATAAGATCATTATTTACGTCCTTGGTGATACACCAATCAGTTCTCCAGCTCACTTCATCCTTATTTGGAGATCCCGTCTTTTTTGAAGTGCTGAAATTTAAAGGAGGAATTACTATAATTCCACAACAGAATGCATTTCCTTTGCAGAAAGTGCAAACAAAATTCAATTTTTCTTTGAATTTTCCCATATATCAAATACAAGTACATTTCAATGAGCTGACAAATCAGCTAAAGTCTGGATTACATCTGACATCCTATGAGAACTTGCAAGTCGTCTTGTCAAATTCTGAAGGTTCAACAGTAGATGCTCCCACGATTATTCAATCCTCGGTTCTACTTGCGGTTGGGATTCCTCCATCCAAAAAGAGGCTAAAGCAATTGGCGCAAACCATCATGGGACCTCATAATCTTGGCTTGAATAACACTGAGTTTGGTAGGGTTAAGCAAGTCAGACTTTCAACCATCTTGCAGCACTCCCTTAACGGAAGTGATACCGGCTCCGCGAGATCACCTGCTCCTGCTCCAGTGCCTCATTCCTCACACCATCACCACCACCACCGCCATCATCATCATCACCACCATCACGATACCCATCTAACTCCTGCAACTTCTCCTATACCCGCACCTGCACCTACACCTAATCCTTGGGAGGGTGTAACTACACCTGGAGTTGGTTCTCCCGCATCTACAAAAAGTGCACCTACACCTCAGAAAAGTTCTCAAGCTCATCCTCCTGATTGCCCATTTGAGCGTAGAAAAAGGTCTACGCGTAATGCTAGGAGACATACTTATCTAACACCTTCCATTGCCCCTAGCATTGAACATCATCACCATGTTCCTATTTCATCACCAAAACCACAGGTTGAACCTCCTACACATGCCTCTCATTCAGTACCTGCTTTGAGTCCTTTGCCAAATGTAGCTTTTGCTCATGCGGAGCCCCCACCTAAGAGCGGCCCTGCTGCAGAACAACCACCCACACAGTTTCATGGGTTATCAATATCACCATCCTCTGCAGGTTGTCTTGGAGCTGTTAAATGGACATCTTTAATATTTGTTGTACTTATGTTACATGTGTGA 1554 0.4434 MGKSEEEQHLPRGATSSDRPQNAETECRRCCCCSQIQKLVGFRCILVFLFSLALFLSALFWLPPFLHLADQKNLHDDSKYKGHDIVASFIVHKPVTVLEDYKLQLAREIFDEIEAPSTTTVNILSLDPLPRPNTTKVVFAVDPDGGEYSEASSPAISLIRSLFTSLVIHQSVLQLTSSLFGDPVFFEVLKFKGGITIIPQQNAFPLQKVQTKFNFSLNFPIYQIQVHFNELTNQLKSGLHLTSYENLQVVLSNSEGSTVDAPTIIQSSVLLAVGIPPSKKRLKQLAQTIMGPHNLGLNNTEFGRVKQVRLSTILQHSLNGSDTGSARSPAPAPVPHSSHHHHHHRHHHHHHHHDTHLTPATSPIPAPAPTPNPWEGVTTPGVGSPASTKSAPTPQKSSQAHPPDCPFERRKRSTRNARRHTYLTPSIAPSIEHHHHVPISSPKPQVEPPTHASHSVPALSPLPNVAFAHAEPPPKSGPAAEQPPTQFHGLSISPSSAGCLGAVKWTSLIFVVLMLHV* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1915 517 MobiDBLite consensus disorder prediction 336 355 - -
Psa3g1915 517 PANTHER F20B24.21 1 516 - -
Psa3g1915 517 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 516 - -
Psa3g1915 517 MobiDBLite consensus disorder prediction 381 432 - -
Psa3g1915 517 MobiDBLite consensus disorder prediction 381 400 - -
Psa3g1915 517 MobiDBLite consensus disorder prediction 320 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1915 Psa-Chr3 173027401 173032691 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1915 1 513 C3H Transcription Factor Family AT3G10810 44.636 1.07e-92 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1915 - - gmx:100792490 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1915 3 173027401 173032691 Psa3g1915 3 173027401 173032691 ECH