Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1914 ATGGGGTTGCAACAATGGACAAGCTTGCATTTCTCCCGATATATATATACCACAAAAGACTATGCTCCTAAGTTGGTGGATGCTCTAAAGACTGAATTAGAAAGTTTTTATGGAAAGAATCCACTGGAATCAAAAGATTTGTCACGCATTGTAAACTCGAACCACTTTGCTCGCTTGACTAAGCTTTTGGACGATGATAAAGTCCTGGTGGATAGAATAGAAGAAAGCTTTGAAGTGATAAATTCAGGAACAAAGCCTCTTGCTGCATATATATTACCAACAATAAGAATCTCAAGGAGCAGTTTGTTAAGACGATTTCCGCTGGTG 327 0.3853 MGLQQWTSLHFSRYIYTTKDYAPKLVDALKTELESFYGKNPLESKDLSRIVNSNHFARLTKLLDDDKVLVDRIEESFEVINSGTKPLAAYILPTIRISRSSLLRRFPLV 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1914 109 SUPERFAMILY ALDH-like 13 92 IPR016161 GO:0016491
Psa3g1914 109 PANTHER ALDEHYDE DEHYDROGENASE 13 68 - -
Psa3g1914 109 PANTHER ALDEHYDE DEHYDROGENASE 69 94 - -
Psa3g1914 109 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 13 70 IPR016163 GO:0016620
Psa3g1914 109 PANTHER ALDEHYDE DEHYDROGENASE 13 68 IPR012394 GO:0006081
Psa3g1914 109 PANTHER ALDEHYDE DEHYDROGENASE 69 94 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1914 Psa-Chr3 172918773 172919488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1914 14 92 Aldehyde Dehydrogenase Gene Family AT1G44170 45.528 9.32e-26 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1914 K00128 - gmx:100778722 112.849