Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1905 ATGGAAGGAGATAAATGTTGTTCAAGTTTATTTCAAAGGTGCAAGCCTTACATAGCTATGATTTGTCTGCAATTTGGTTTTGCTGGTATGAATATAATAACAAAAGTCTCACTCAACCGTGGAATGAGTCATTATGTTCTTGTTGTTTATAGACACGCTTTTGCTACCGCAGCTATTGCTCCATTCGCTATAGTTCTTGAGAGGAAGATAAGGCCGAGAATTACATTTCTTATGTTCATGCAAATGTTCGTCTTGGGACTCCTTGGACCTGTGATTGATCAGAATCTATACTATGCTGGGTTGAAATTCACATCTCCAACATACTCATGTGCTATTAGCAATATTCTTCCTGCTATGACATTTGTAATGGCTGTTATTTTCAGGATGGAGAAATTGGACATGAAAAAACTAAGATGCCAAGTAAAAGTGATTGGAACTGTAATAACAGTTGGTGGGGCTATGGTGATGACACTATACAAAGGACAAGTTATTCAAATTTTAAGTTCTCAATACATGCATCATCCTAGAAATTATGTAGCTGAAAACAATACTGATTCTGGTGAAAAAGATTGGGTTAAGGGTTCTATTCTCCTCATAATTGCTACCTTTGCTTGGTCTTCTTTCTTCATCCTTCAAGCAGTAACATTAAGGAAATATTCAGCACAGCTTTCACTCACAGCCATAGTATGTTTCTTGGGAACACTTCAATCAATTGCAGTAACATTTGTTATGGAGAGTAAGCCAAATGTTTGGAACATTGGTTGGGACATGAATTTGTTAGCCGCGGCATATGCTGGTATAATATCATCAGGTCTTACATATTATGTTCAAGGGATTGTGATGCAAAAGAAAGGACCAGTTTTTGTCACTGCTTTCAGTCCTTTGATGATGATCATTGTAGCTATCATGGGCACTTTCATCCTGGCAGAAAAATTATATCTTGGAGGTGTTATTGGAGCAATTTTGATCGTAATAGGACTTTACTCGGTTCTATGGGGAAAAAACAAAGAAAACAAAGAGATTGAAGCAGAGACTACAATCACAGAAGGAACAAAGTGTTGTGTAGAAAATGGAGGATTGAAAACAGTGATTGAAGAAGGTGTTGAAATAAATGACATTGAAGTGCAGAAGGTTGAAGCTACTAAAGTTTTAAGGGTCACAATTATTAGTGCTCCAAAACTTTAA 1185 0.3662 MEGDKCCSSLFQRCKPYIAMICLQFGFAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFAIVLERKIRPRITFLMFMQMFVLGLLGPVIDQNLYYAGLKFTSPTYSCAISNILPAMTFVMAVIFRMEKLDMKKLRCQVKVIGTVITVGGAMVMTLYKGQVIQILSSQYMHHPRNYVAENNTDSGEKDWVKGSILLIIATFAWSSFFILQAVTLRKYSAQLSLTAIVCFLGTLQSIAVTFVMESKPNVWNIGWDMNLLAAAYAGIISSGLTYYVQGIVMQKKGPVFVTAFSPLMMIIVAIMGTFILAEKLYLGGVIGAILIVIGLYSVLWGKNKENKEIEAETTITEGTKCCVENGGLKTVIEEGVEINDIEVQKVEATKVLRVTIISAPKL* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1905 394 PANTHER WAT1-RELATED PROTEIN 10 364 - -
Psa3g1905 394 PANTHER WAT1-RELATED PROTEIN 10 364 IPR030184 GO:0016021|GO:0022857
Psa3g1905 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
Psa3g1905 394 Pfam EamA-like transporter family 16 157 IPR000620 GO:0016020|GO:0016021
Psa3g1905 394 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020|GO:0016021
Psa3g1905 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1905 Psa-Chr3 172227752 172230163 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1905 1 367 Nodulin-like Gene Family AT5G07050 62.434 9.52e-174 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1905 - - gmx:100793545 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1905 3 172227752 172230163 Psa3g1905 3 172227752 172230163 ECH