Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1882 ATGTCTGAAAGAATTTTCATCAGAAATGTTGAAGATAAAAAATCAAAACACAAAATGGTGGAAGAATCAAAGTCAAAACCGAGGAAGGAATCAAAATATATTATACCATCCTCCGAAGTTGATTCTGAGAAAGGCAAAAGGGTAAAAGAGACGGAGGCAAAACTACATGAAGAACTCAAGGTAATAACACCATCTGTTGAATCTAAGGATTTATTGACTCTTGGACTTGTTAATAGCCACAAGCCAACTTCCATTTTGTTAGAGAATGATGAACATTCAAGTTCGTCTCAAAATGTTGCTAAAGTTTTACCTGAGCAAAAAGTGAAGGAATTTCTTTGTCTTTTTTGTAACAAGAAGTTCTCAAATTCTCAAGCGCTTGGAGGTCACCAAAACGCTCATAAGCGTGAACGTGTCTTCAAAAAAATTGAACGAAAAAGGAGGGAGGAAGAAATGGATTCAATCTTAAGGTATAGACCTAGTTATCCATACCCTTATCCTTATTCAAGCCCTATTCACTATCAAGGGTATCCTTATTTTTGTGGAAATTTGCAGCAACCAATTGACACTCATACGAACAATACCATGTCTTCTTGGCTTGGTTCTCCATATGGTGGCTATGGAGGGATGTATATGCCAAATACACCCTCTCCATCAACTCCATTTGTTATGTCAATGCCAAAGTCATCCCTCATATCACAACAATTTGCGATGACTAATTTTTTTACCAGAAATCAAACTCTTCCACTACCAATTCCTCAAAGGTCAAACACTGTGGAATTGAGACTTTCTGTTCAAGCTAATCAACCCCCTTCATCTGGTGAGGGTGCAGAAGGAAGTTCCAATGCTCAATTTCCTTCTTGTGATCTTCCAATAGAAACTCGTGATTTTATTGGAGAAAGGAGCCTTCTAGCAGAACTTGATGTGTCTTCATCATCAAAACAATCAACATTGGAGGAACTCGACTTGAATCTCAAACTTTAA 981 0.3741 MSERIFIRNVEDKKSKHKMVEESKSKPRKESKYIIPSSEVDSEKGKRVKETEAKLHEELKVITPSVESKDLLTLGLVNSHKPTSILLENDEHSSSSQNVAKVLPEQKVKEFLCLFCNKKFSNSQALGGHQNAHKRERVFKKIERKRREEEMDSILRYRPSYPYPYPYSSPIHYQGYPYFCGNLQQPIDTHTNNTMSSWLGSPYGGYGGMYMPNTPSPSTPFVMSMPKSSLISQQFAMTNFFTRNQTLPLPIPQRSNTVELRLSVQANQPPSSGEGAEGSSNAQFPSCDLPIETRDFIGERSLLAELDVSSSSKQSTLEELDLNLKL* 327
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1882 326 MobiDBLite consensus disorder prediction 1 32 - -
Psa3g1882 326 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 16 326 IPR044246 GO:0009788
Psa3g1882 326 SUPERFAMILY beta-beta-alpha zinc fingers 109 140 IPR036236 -
Psa3g1882 326 ProSitePatterns Zinc finger C2H2 type domain signature. 113 133 IPR013087 -
Psa3g1882 326 Gene3D Classic Zinc Finger 90 158 - -
Psa3g1882 326 ProSiteProfiles Zinc finger C2H2 type domain profile. 111 138 IPR013087 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Psa3g1882 Psa-Chr3 170572857 170573837 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1882 86 326 C2H2 Transcription Factor Family AT5G25160 28.455 4.66e-11 60.1