Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1870 ATGGCATCTAGTTCAATGTCAGCTTCTGGCTCATGGAGTGTTAAGGACAACAAAGCCTTTGAAAGAGCTCTAGCTGTTTATGACAAAGACACACCAGATCGTTGGTACAATGTAGCTCATGCTGTTGGTAGCAAAACTCCAGAGGAAGTTAAGAAACACTATGAACTTCTCGTTGAAGATGTTAAGCATATTGAGTCAGGGAAAGTTCCATTCCCAAATTACAAGAAAATTTCAGGCTCTCAAGAAGAGAAAAGGATGAGGAACCTGAGCCTTCATTGA 279 0.4086 MASSSMSASGSWSVKDNKAFERALAVYDKDTPDRWYNVAHAVGSKTPEEVKKHYELLVEDVKHIESGKVPFPNYKKISGSQEEKRMRNLSLH* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1870 92 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 1 91 - -
Psa3g1870 92 CDD SANT 18 58 IPR001005 -
Psa3g1870 92 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Psa3g1870 92 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Psa3g1870 92 Gene3D - 2 71 - -
Psa3g1870 92 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Psa3g1870 92 SMART sant 8 60 IPR001005 -
Psa3g1870 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 91 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1870 Psa-Chr3 169800089 169801099 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Psa3g1870 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1870 - - gmx:100818368 162.54