Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1832 ATGTCGCTCGAGAAGAGCAAAGAGAAAGAGAACGAGTTTTTTGTTGACGCTACCGAAGAAGAAACCGATATCGAAGCTGTTAACTACGATAGTGAAAGTAGTCATGAAAATGATGGTGGCAGTTACGATGAACTCGATCGCAATGAAGGACAACCTGAATCTTTCTCTTCTCAACAATGGCCTCAAACTTTCAATGAGGCTATTGATCCTTTAACGATTAATGCTCCGAATCTTGGATCAATTCTGAGAGCGCCGAGTGTTCTATACTCGAGCTTTGTGAGTCGTTCATCAAGGAGTTATTTGGAGTTACAAGATGGAAAGGCTTCTTTTCTGTCTGGGAGTCAAATTCAGGAAGGCTTTCCTAGACAATCGACATGGTGGGAAAAAGCTTCAATTCAAATGCACATATGTGTTGTACCAGGCCCGCCGACATTATATGTATGGTGCTGCATGCAGTCCATCTTCTTTTGCCTTATTACTTCTGGCACGAAGTCCTATGTGACACTATCAATCAGTTATGAGTGGCAGCTGAGGGTTACTTGGTTCAATGTGATCGCGCTATTTGTGTTGTCGTGTTGGACTAAGAGAATGCATGGTTGGATTCCATCAGACTGCTCCATCGTAAAGTGGAGGTGGCATTCGCATTTGCTTTTGGTTATCGTATGTTGCTTAGCTGTTGCAGGACTTCAGTTTTCCAATATAGAAGCTCGAGACGATCAGTCTATGGCTAACAAAAGCAGGAATTACAAAGGGCAGATAGATCATCAAGCGGTAAGGTGGCAACAAGTTATCAGGTTATTAAGAATAAGGTCCGCCGGCATTATAGAATTTCAATTTGCTTCTTTTTTTCTTTTTCCTTTTCCCTTAACTATCAACAAATATGCTTTGATGATGAACCCACTGGCAAGAAGTGTAGAGGAATTGTTGCCTGCTAGCATCTCAAACACTAATTGGTGTTTTCTTCTTCTAAGAACAGCACTGGTTACATCTACTGTTGTTGCTGCTTTTCTGATTCCATTTTTTGGGCTAGTGATGGCTTTAATTGGTTCTCTCCTCAGTGTTCTTGTGGCAGTGGTATTGCCAGCTTTATGTTTTCTAAGAATTGTGGGGAAAAAGGCAACAAAAACACAGGTTGCTCTCAGTGTTGTAATTACTGCATGGGGAATAGTTTGTGCTGCTTTTGGATCATATTCATCTCTACTAAAGATTATAAACCAGCACTGA 1224 0.4118 MSLEKSKEKENEFFVDATEEETDIEAVNYDSESSHENDGGSYDELDRNEGQPESFSSQQWPQTFNEAIDPLTINAPNLGSILRAPSVLYSSFVSRSSRSYLELQDGKASFLSGSQIQEGFPRQSTWWEKASIQMHICVVPGPPTLYVWCCMQSIFFCLITSGTKSYVTLSISYEWQLRVTWFNVIALFVLSCWTKRMHGWIPSDCSIVKWRWHSHLLLVIVCCLAVAGLQFSNIEARDDQSMANKSRNYKGQIDHQAVRWQQVIRLLRIRSAGIIEFQFASFFLFPFPLTINKYALMMNPLARSVEELLPASISNTNWCFLLLRTALVTSTVVAAFLIPFFGLVMALIGSLLSVLVAVVLPALCFLRIVGKKATKTQVALSVVITAWGIVCAAFGSYSSLLKIINQH* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1832 407 PANTHER BNAC04G01690D PROTEIN 291 405 - -
Psa3g1832 407 MobiDBLite consensus disorder prediction 1 59 - -
Psa3g1832 407 PANTHER OS05G0424000 PROTEIN-RELATED 291 405 - -
Psa3g1832 407 MobiDBLite consensus disorder prediction 28 50 - -
Psa3g1832 407 Pfam Transmembrane amino acid transporter protein 291 398 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1832 Psa-Chr3 166238094 166244203 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1832 291 406 Amino Acid or Auxin Permease AAAP Family AT5G02180 43.103 1.63e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1832 K15015 - mtr:MTR_7g089905 157.532