Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1807 ATGTCTCGTGCATTTGGCAACCGTATGCTGAAGCCATTTGTTGTAGCAGAACCTGAGATCCAAGAGCAGAAAATAGATGAAGAAACCGAGGTGCTTGTTCTTGCAAGTGACAGACTCTGGGATGTAGTACAGAATGATGATGTTGTTTCAATTGCACGGGCGGAAGAGGCAGCCGAGGCAGCTGCTCGGAAGTTAACAGAAGCCGCATTTAATCACGGTAGTGCTGATAACATTGCTTGCATCGTGGTACGATTCAATCATGAAAAAAGACACCCAGCTAATCCTGATAAAGCAGATCCAGCTAACATTTCACTAACATAA 321 0.4455 MSRAFGNRMLKPFVVAEPEIQEQKIDEETEVLVLASDRLWDVVQNDDVVSIARAEEAAEAAARKLTEAAFNHGSADNIACIVVRFNHEKRHPANPDKADPANISLT* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1807 106 PANTHER ALPHABET, ISOFORM E-RELATED 1 92 - -
Psa3g1807 106 Coils Coil 51 71 - -
Psa3g1807 106 CDD PP2Cc 1 85 IPR001932 -
Psa3g1807 106 ProSiteProfiles PPM-type phosphatase domain profile. 1 85 IPR001932 -
Psa3g1807 106 Pfam Protein phosphatase 2C 1 78 IPR001932 -
Psa3g1807 106 Gene3D - 1 94 IPR036457 -
Psa3g1807 106 SUPERFAMILY PP2C-like 1 87 IPR036457 -
Psa3g1807 106 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1807 Psa-Chr3 159471115 159471586 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1807 1 89 PP2C-type Phosphatase Gene Family AT5G53140 71.910 1.53e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1807 K17506 - gmx:100805795 150.599