Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1779 ATGCATCCATGGCTCCAAACTGTAATCGACATGTGCACGGGGAAGAACAAAGGAGATATCAAGGCTTTCAACGATGATCCTCTCGGAAGATCGATCAGTCTCGAAAAACACTGCTTCGGAGAATTTTCCATGGCTAGTGTTCAAGCCAATGTGTTCATGGAAGATCAAAGCCAGGTCGAAGTTGCCTCCAACAATGCACTCTTTGTTGGCATTTACGACGGTCACGGTGGCGTCCACGCTTCCTCGTTCCTCGTTGAACAGCTCTTCAGAAAGCTATTGACTCACGAGAATGATGATACTATAACCGAAGATACTCTAAGAGACGCTGTTTCTGCTACGGAAGCTGATTTTATGACTTACGTCAACAACAATTTTAATATAATGCCACATCTATCAAAAGTTGGTTCATGCTGTCTTGCTGGAGTTATATGGAAAAAGACGCTATACATCGCGAATCTTGGAGATTCGCGCGCCATCATTGCTTCTTTGGTGAATGGAGTACCGAGAGTTGAACAATTGACAAGAGATCACAATTGTAGTTATGAAGTTATTAGAGAAGAACTCATGTTAGAGTACCCACATGATCCCGAAATTGTGATGATGAGGAATGGAGCGTGGCGCGTTAAAGGCATCATTGAGGTTACTAGAACTATTGGTGATGCATATTTGAAAAGGCCTGATTTTACTTTTCGCGATTCGTTTCCCAACGATCCGAATGGGCCTAAACTTCCTAGTAGCTGTGTGCTATCAGCAGAACCTGAGATGCGTTCGAGGCCTTTAAGAGATAGTGATAAGTTTCTTATATTTGCTTCTGATGGACTTTGGGATTTCATGACAAATGAACAAGCTGCTCAAATTGTTTCAAGCAATCCAAGAAATGGAATTGCGAAAAGGCTTTTGAGTGTTGCGCTGGCGGAAGCTGGTAGAAGAAGGGGAGTTACCTATGCGAACATTCAGGCTGCTCAGCCAGGACGTGACAATCTGAGCAGGAGGTCTTTTCATGACGATATAAGTGTGATTGTTGTGTTCTTAGACAGAATGTCGTTTCTGAGGACACGCCCACTTAATATCTCCTACAGAGGCTCAAATGCGGAGTCTCGACCATCTGATTTCGCAAACTCTGGATTAACCTCTTTGGACCTGAAGCCAATGAGTCCTCGGCGTCTGAAGGAGACTTTCAGAAGACGGATGAAAACAAAATCTAGCAGCCCTCGGACTCCTGAGAGTCCTCTGGGTGAAAGCTCTCGGGCTAGGGACACTGACAACCTTATTAATCAGAGCCCTCCGACTCCTCGAAGCCGTTGGGAGTCTCTGAAAAAGCGGATTTTTCCAAATCGAAGACGAATATGA 1350 0.4459 MHPWLQTVIDMCTGKNKGDIKAFNDDPLGRSISLEKHCFGEFSMASVQANVFMEDQSQVEVASNNALFVGIYDGHGGVHASSFLVEQLFRKLLTHENDDTITEDTLRDAVSATEADFMTYVNNNFNIMPHLSKVGSCCLAGVIWKKTLYIANLGDSRAIIASLVNGVPRVEQLTRDHNCSYEVIREELMLEYPHDPEIVMMRNGAWRVKGIIEVTRTIGDAYLKRPDFTFRDSFPNDPNGPKLPSSCVLSAEPEMRSRPLRDSDKFLIFASDGLWDFMTNEQAAQIVSSNPRNGIAKRLLSVALAEAGRRRGVTYANIQAAQPGRDNLSRRSFHDDISVIVVFLDRMSFLRTRPLNISYRGSNAESRPSDFANSGLTSLDLKPMSPRRLKETFRRRMKTKSSSPRTPESPLGESSRARDTDNLINQSPPTPRSRWESLKKRIFPNRRRI* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1779 449 MobiDBLite consensus disorder prediction 416 433 - -
Psa3g1779 449 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 10 349 - -
Psa3g1779 449 MobiDBLite consensus disorder prediction 384 402 - -
Psa3g1779 449 PANTHER ALPHABET, ISOFORM E-RELATED 10 349 - -
Psa3g1779 449 ProSiteProfiles PPM-type phosphatase domain profile. 41 344 IPR001932 -
Psa3g1779 449 SUPERFAMILY PP2C-like 39 345 IPR036457 -
Psa3g1779 449 ProSitePatterns PPM-type phosphatase domain signature. 68 76 IPR000222 GO:0043169
Psa3g1779 449 Pfam Protein phosphatase 2C 56 313 IPR001932 -
Psa3g1779 449 Gene3D - 27 349 IPR036457 -
Psa3g1779 449 MobiDBLite consensus disorder prediction 362 380 - -
Psa3g1779 449 MobiDBLite consensus disorder prediction 362 449 - -
Psa3g1779 449 SMART PP2C_4 34 342 IPR001932 -
Psa3g1779 449 CDD PP2Cc 42 344 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1779 Psa-Chr3 157929656 157932091 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1779 34 372 PP2C-type Phosphatase Gene Family AT5G06750 46.974 3.82e-102 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1779 K01102 - csv:101222146 327.02