Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1733 ATGGCAGAATCAATTCTCATTGATATGTCTAATTCATTGCTTGGGAAGGTTGCTTCTTATGCTTGTCAAGAAGCTTATCTAGCCTATGGTTTGAAAGACAATCTACAAAGTTTCAAAGACTCTTTGATAATTGTCAGAGGTTATCTACTGGATGCTGAGTCCAAGAAGGACCAAAGTCATGCTTTGCGTGAATGGTTCAAGCAGATTCAAAACATTTGCTTTGATGCTGAAGACATATTTGATACATTTGAGTTGCAAGACAAGAGGAAGAAAATTGTCAAATCCTCCGGAAGCATCAGAAAGAAGGAAAGAGAAACGACTTATCCTGATGTTAATGTTACAAGTGTAATAGGAAGGGATGATGATAAAGATGAAATTATCAAGCTTTTGATGCAACCTTTTCCTCAGGGTGGAAATGGTGGTGATAAAAGCATGTGTGTCATTCCCATTGTGGGAATAGGAGGATTAGGAAAGACCACACTTGCAAAGTTGGTGTATAATGATGACACAATGGATCAACTTTTCCAATTGAAGATGTGGGTGTGTGTCGCTCTTAATTTTGACATCAAGCAGATAATCATTAATATCATCAACGCCGCGAGTACTTCAGATTCTAAAGCAGCTTCAGCACCACCGACGAGTCTCACTCCCCAAGAAAACATCAACAACTTAGATATTGTGCAACTAGTAAGTCGTCTGAAACAAAAACTTTCTGGTCAAAAGTTTTTACTTGTGTTAGATGACATATGGAATGAAGATCGTGAAAAGTGGATTGAGTTGGAAGATTTGATAAAAGTTGGCGCACCAGGAAGCAAAATTTTGGTGACAACACGTAGTAAATCAGTAGCTTGGATGATGGGCAATGTTCCCTCCTATGAATTAAAAGGTCTTTCTCCAAAGGAATGTCTATCTCTATTTGTCAAATGTGCATTCAAGGAAGGTGAAGAGAAAAGATATCCAAATCTAAAGAAGATCGGAGAAGAGATTGTGGAAAAATGTCACGGGGTTCCACTAGCCGTGAAAACATTAGGAAAATCTCTCTTCTCAGACTTTAATATAAACAGGTGGGAATTTGTTAGGGATTCTGAGATGTGGAATTTAGAAAAAAAGAAAGATGGTATTTTACCTGCTTTAAAAGTAAGTTATGATCAAATGCCGTCCATCCTAAGACAATGTTTCGCTTATTTTTCCCTTTATCCCAAAGATCATATCTTTGATAGTTATGTAATGTGTAGTCTTTGGGTAGCCCTTGGATTAGTACAATTCCGAAATGGAAGTGAAAAGCTAGAGGATGCTGCAAGAAAATATATCGACGAGTTACATTCAAGATCATTTCTTCAGGATTTCGATGACAGTGGCCCCTTTTGCCTGTTCAAAGTACATCATTTGATACACGATCTTGCATTGTATGTTGCAGGAGAGGACTTTGTAGCGGTAAACTCCCAAACTCGAAGTATTCCTCAGCAAGCAAGACATTTATCATTTGTTGAAGATGAGTCATTTCGCCATGCTTTGCTCCCAGAGTCGAGAAGTGTTAGAAGCATACAATTTCCCATCTTAAAAATGGGTCTTGAGAGTGAAAATGGTCTGAATACATGGTTGTCAAGGTACACATTCTTGCGTTATTTAGACTTAAGTGACTCTTGTTTTGAAACTGTGCCCAACTCAATTGCAAAATTAGAGCACCTGCGTTTCCTCGATCTTTCTCGTAATGACAAAATCAGAATACTACCAAATTCTATTTCCAAACTTCTAAATTTGCAAGTTTTGTTGCTCAGTGGATGCACAGAGCTCAAAAGTTTGCCTAAAGGATTAGGGAAGTTGATTAACCTTCGACGTCTGATTGTCACTACAAAACAATCTATGCTACCACAGGATGAGTTCGCTAGCTTGAACAATCTTCAAACTTTGAGTTTTCATGATTGTCACAATTTGAAGCTTTTGTTCAAACAATCACTCCCTTCCGTTGAAGAACTGTATTTTAAATCATGTCGGAGCCTGGAGTGCTTACCTCTTTCTATTTTTCCTAAATTGCAGACATTGTTTATTCGTGATTGTCGGATGTTAAACTTGTCATTGGACAATGAAAACTCAATCCAAAAGTTGAGGATGAAACATCTGTATCTCTATGATTTTCCAAAGCTTCTAACACTCCCTCAATGGATCGTATGTGCGGTGGACACTTTAGAGACCTTTGCAATTGTCAATTTTCCTAATCTTCAAATGCTTCCTGAGTATCTTTCTACAATGGCTCTTCTAAAGAGGATCTGTATTGCTCGCTGTTCTCAACTCTCGACTCTTCCAAGTGATTTGCATCGCCTCACTGCACTTGAATATTTACAAATACTTGATTGCCCTGAATTGTTCCGAAAATGTCAGCCTCAATTTGGCGAGTACTGGCCCATGATTCGTGATATTAAAAACATTTGGATTGAACAAGATGAGGAGGAGGACGACGAGGAGGAGGACGACTGA 2475 0.3838 MAESILIDMSNSLLGKVASYACQEAYLAYGLKDNLQSFKDSLIIVRGYLLDAESKKDQSHALREWFKQIQNICFDAEDIFDTFELQDKRKKIVKSSGSIRKKERETTYPDVNVTSVIGRDDDKDEIIKLLMQPFPQGGNGGDKSMCVIPIVGIGGLGKTTLAKLVYNDDTMDQLFQLKMWVCVALNFDIKQIIINIINAASTSDSKAASAPPTSLTPQENINNLDIVQLVSRLKQKLSGQKFLLVLDDIWNEDREKWIELEDLIKVGAPGSKILVTTRSKSVAWMMGNVPSYELKGLSPKECLSLFVKCAFKEGEEKRYPNLKKIGEEIVEKCHGVPLAVKTLGKSLFSDFNINRWEFVRDSEMWNLEKKKDGILPALKVSYDQMPSILRQCFAYFSLYPKDHIFDSYVMCSLWVALGLVQFRNGSEKLEDAARKYIDELHSRSFLQDFDDSGPFCLFKVHHLIHDLALYVAGEDFVAVNSQTRSIPQQARHLSFVEDESFRHALLPESRSVRSIQFPILKMGLESENGLNTWLSRYTFLRYLDLSDSCFETVPNSIAKLEHLRFLDLSRNDKIRILPNSISKLLNLQVLLLSGCTELKSLPKGLGKLINLRRLIVTTKQSMLPQDEFASLNNLQTLSFHDCHNLKLLFKQSLPSVEELYFKSCRSLECLPLSIFPKLQTLFIRDCRMLNLSLDNENSIQKLRMKHLYLYDFPKLLTLPQWIVCAVDTLETFAIVNFPNLQMLPEYLSTMALLKRICIARCSQLSTLPSDLHRLTALEYLQILDCPELFRKCQPQFGEYWPMIRDIKNIWIEQDEEEDDEEEDD* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1733 824 PANTHER OS05G0492600 PROTEIN 30 792 - -
Psa3g1733 824 Pfam Rx N-terminal domain 12 96 IPR041118 -
Psa3g1733 824 PANTHER DISEASE RESISTANCE PROTEIN RP 30 792 IPR044974 GO:0006952
Psa3g1733 824 Gene3D - 10 103 - -
Psa3g1733 824 Gene3D - 381 469 IPR036388 -
Psa3g1733 824 PRINTS Disease resistance protein signature 147 162 - -
Psa3g1733 824 PRINTS Disease resistance protein signature 236 250 - -
Psa3g1733 824 PRINTS Disease resistance protein signature 333 347 - -
Psa3g1733 824 PRINTS Disease resistance protein signature 558 574 - -
Psa3g1733 824 Gene3D - 296 380 IPR042197 -
Psa3g1733 824 CDD RX-CC_like 2 91 IPR038005 -
Psa3g1733 824 Gene3D - 104 290 IPR027417 -
Psa3g1733 824 Gene3D Ribonuclease Inhibitor 480 807 IPR032675 -
Psa3g1733 824 SUPERFAMILY L domain-like 459 803 - -
Psa3g1733 824 Pfam NB-ARC domain 141 383 IPR002182 GO:0043531
Psa3g1733 824 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 395 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1733 Psa-Chr3 154034292 154037589 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1733 148 788 WRKY Transcription Factor Family AT5G45050 22.009 1.61e-11 66.2