Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1732 ATAATCCTTAAAATCATCAACGCTGCCAGTATTGCAGATTCTAAAGCAGCTTCAGCTCCATCGATCGATCTCGCTCCCCAAGAAAACATCAACAACTTAGATATTATGCAACTAGTAAGTCGTATGAAACAAAAACTTTCTGGTCAAAAGTTTTTACTTGTGTTAGATGACATATGGAATGAAGATCGTGAAAAGTGGATTGAGTTGGAAGATTTGATAAAAGTTGGTGCACCAGGAAGCAAAATTTTGGTGACAACTCGTAGTATATCAGTTGCTTGGATGATGGGTAATGTTCCCTCATATGAATTAAAAGGTCTTTCTTCAAAGGATTTTTTATCTCTATTTGTCAAATGTGCATTCAAGGACGGTGAAGAAAAAAGTTATCTAAATCTAGTGGAGATCGGAAAAGAAATTGTCAAAAAATGTCACAGGGTTCCACTAGCTGTGAAAACATTAGGAAGTTCACTCTTCTCAAACTTTGATATAAATAAGTGGGAATTTGTGAGGGACTCTGAGATGTGGAATTTAGAACAGCAAAAAAATGGTATCCTACCTGCCCTAAAAGTAAGTTATGATCAAATGCCATTCTATCTAACAGAATGTTTTGCTTATTTTTCCCTTTATCCCAAAGATCATATCCTTGATACTCATGGAACGTGTGGTCTTTGGGCAGCCCTTGGATTAGTTCAATCCCAAAATGGAAGTGAAAAGCTAGAGTATGTTGCAAGAAAGTATATTGATGAGTTACATTCAAGATCATTTCTTCATGAACTCAATGACTATGGCGCCGGTTGCTATTTCAAAGTACATCATTTGATACACGATCTAGCATTGTATGTTGCAGGAGAGAACTTTGTAGTGCTAAACTCACAAACTCGAAATATACCTCAACAAGCAAGGCATTTATCATTTCTTGAAGATGAGTCATTTGGCCATGCTTTGTTCCCAAAGTCTAGAAGTGTGAGAAGCATACAATTTCCCATCTTGGGAATGTCTCTTGAGAGTGAAAGTGTTTGGAATACATGGGTGTTAAGGGGATGCACAGAGCTTGAAAAGTTGCCCAAAGGATTAGGAAAGTTGACTAGCCTTCGACATCTGAGTGTCACTACAAAACAACCTACTCTACCATATTATGAATTCGCTAGTCTGAACAATCTTCAAACATTGTGTTTTTATGATTGTGTCAATCTGAAGTTTTTGTTCAAACAAACAGTACTCCTGTTAGAATATTTCCAGCTGCAACTTATTATGCATTAG 1257 0.3675 IILKIINAASIADSKAASAPSIDLAPQENINNLDIMQLVSRMKQKLSGQKFLLVLDDIWNEDREKWIELEDLIKVGAPGSKILVTTRSISVAWMMGNVPSYELKGLSSKDFLSLFVKCAFKDGEEKSYLNLVEIGKEIVKKCHRVPLAVKTLGSSLFSNFDINKWEFVRDSEMWNLEQQKNGILPALKVSYDQMPFYLTECFAYFSLYPKDHILDTHGTCGLWAALGLVQSQNGSEKLEYVARKYIDELHSRSFLHELNDYGAGCYFKVHHLIHDLALYVAGENFVVLNSQTRNIPQQARHLSFLEDESFGHALFPKSRSVRSIQFPILGMSLESESVWNTWVLRGCTELEKLPKGLGKLTSLRHLSVTTKQPTLPYYEFASLNNLQTLCFYDCVNLKFLFKQTVLLLEYFQLQLIMH* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1732 418 SUPERFAMILY L domain-like 268 399 - -
Psa3g1732 418 PRINTS Disease resistance protein signature 45 59 - -
Psa3g1732 418 PRINTS Disease resistance protein signature 142 156 - -
Psa3g1732 418 PRINTS Disease resistance protein signature 381 397 - -
Psa3g1732 418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 204 IPR027417 -
Psa3g1732 418 Gene3D - 190 278 IPR036388 -
Psa3g1732 418 Gene3D - 7 98 IPR027417 -
Psa3g1732 418 PANTHER OS05G0492600 PROTEIN 37 390 - -
Psa3g1732 418 Pfam NB-ARC domain 31 192 IPR002182 GO:0043531
Psa3g1732 418 Gene3D - 105 189 IPR042197 -
Psa3g1732 418 Gene3D Ribonuclease Inhibitor 288 409 IPR032675 -
Psa3g1732 418 PANTHER DISEASE RESISTANCE PROTEIN RP 37 390 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1732 Psa-Chr3 154013150 154014577 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1732 27 228 WRKY Transcription Factor Family AT5G45050 25.238 5.61e-06 47.0