Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1726 ATGATCATGATGGAGAATCCCTCAGTAAGCGGAGTTCATGATTTCAATATGGCTTCAAGAAAAGCTGGAGAAGCAGCTTTGAGACGATATGAGGCAACACAATGGCTAGAAAGTCAAGTTGGTTCTCTTGGAATATCTAAGCAACCCTCGGAGCGAGAACTTGTTTCTTGCTTGAGAAATGGTCTAATTCTTTGCAAGGCCATTAACAAGATTCATCCCGGAGCAATACCGAAGATAGTGGATACTCAAGTACCAATGCAATCACTTGCCTGGGATTCACAGCCTTTGCCTGCCTATCAGTATTTTGAAAACGTTCGCAATTTTCTTAATGCTGCCGGAGAATTAAAGCTTCCAGCTTTTGAAGCTTCTGATCTTGAAAAGGAAAGTGTAGAGAATGGATCAGCAGGAAAAATTGTTGATTGCATTCTATCTCTGAAATGTTTTCATGAGTTGAAGCAGATGAACAATCAGAGTGGAACCAGCAAACGCTTGAAGTCTCCTTTAGTTATGCAATCAATTAGTAGAATGCAACAAGGAGCCACAACTGCATTACCCTCTGAGGCTTGCAGGCGCTTGGATTTGTCTGCAGCATCTGAAAAAAAGCCTCCTGCCGAGAGTAATTTTCAAACACGAGAAGGAAATATGGAGTCACTTGTCAAGATACTAGTTGACCGAATGCTTGATGCCAAAGAAAATGTCGATGGAAAGATTGTTGCTTCTATTTGCAATGGAGACCTGTCTTTACTGCAGGATCCAATAAACCTATTTAATCAGGTTTTGACTAATTGTTGTGGGGAACAGCCATCTAAGAAGTTCCCTGAGTTGCCATTGCTACTAAAGAATTTTATAAAAGAAGGGAGTAGCTTACCAACTAATCTCACTACCAAAAGCACAAAATCAGATGTTTTCTCTACACCTAAAAGTTCCAAGTGCTACAGAGCTTGCCTTGGGAAGTGCACATGCAATCACAAGCTTCTCATAGACATACAGAAAAAAGAACTTCGGGATCTTAAGGCTTTGAAGTTGAGAATTAAGAGTGAGTTTGAAGAGATGCAATCACAGTTTCTGAATTTTTTCAATGATATAGGAAGTCAAGTAAATGAGATGTCAGCCAAAGCTGTTGGATATCACAAAGTAGTGGAAGAGAACAGAAAACTATACAACATGGTCCAAGATTTGAAAGGTAATATCCGAGTATACTGCAGAATCAAACCTGCATTCAGGGTCGAATCCAAGAATGTGGTTGATTTCATCGGTGAAGACGGTTCTCTATTCATTTTAGATCCATCAAAAACATATGGAAGAAAATCTTTTCAGTTTAATCGGATTTTTGGTCCAACAGCTAGCCAAGATGAGGTTTATAGAGACACTCAACCATTAATTAGATCTGTGATGGACGGTTACAACGTTTGTATTTTCGCTTATGGTCAAACTGGTTCTGGGAAGACTCACACTATGAGTGGTCCTTCAGGTGGAACATCCAAGGATATGGGGATTAATTATCTGGCTCTTAATGATTTGTTTCATATGTCTAATGAAAGGGAGGCTATCATAAAGTATGACATTTATGTCCAAATGGTTGAGATTTACAATGAACAATTTGTTTTCTTAACTAACCTCAAATTAGAGATCCGGAGCTGCAACGAAGATGGTTTAAGCCTCCCTGATGCTAGATTGCGGTCAGTGAAGTCTACAACCGATGTTATGACCCTTATGAAACTTGGCGAGGTTAATCGTGCTGTCAGTTGTACTGCAATCAACAATAGGAGTAGTCGCTCCCACAGTGTACTTACTGTCCATATTAATGGCAAAGATACGTCTGGCAACGCCATTCGCAGTTGCCTTCATTTAGTAGATCTTGCCGGAAGTGAAAGAGTGGACAAGTCTGAAGTCACAGGAGATAGACTAAAGGAAGCACAATATATTAACAAGTCTCTTTCTTGTTTGGGTGATGTGATCACATCACTGGCTCAAAAGAATTCTCACATTCCTTACAGGAACAGCAAACTCACACTTCTTTTGCAGGATTCCTTAGGCGGACATGCTAAAACTTTGATGTTTGCGCATGTGAGTCCCGAAGCAGATTCCTTTGGTGAAACGGTGAGTACTCTTAAGTTTGCTCAGAGGGTTTCCACTGTAGAACTTGGGGCAGCCCGGATAAATAAAGAAAGCAGTGAGGTTATGCAACTCAAAGCACAGGTTGAGAACCTTAAGACTCAGTTGGCCAACAAGGAAAATTCAAAACCGATGTTCAATAGAACTAAGGAACCTCGGACTCCATTAGAAAAAACTCCATTACGACCTCGAAGACTTAGTATTGAAAATTCTAGCATGTCAAAGACTGACAAACCTGTGAAAGCTGAGGATAAAAGTGGAGCCAAGTCACCATCTTACATTCCCCGTTCAAGAAGACTAAGCTTGGAAGGTCCAAGAACTATAAAAAAAGCTGCTGATGTAAACAAAACTTTACAGTTTGAGCCAATGTCTCAACAGAAATATCATCCACGGCAAGATCTAGAAGCAGCAGTGTCAAGTCTAAGTGGCCAATTGAGCAATGAGAAGTCCATATCCGAGTTGCATGCTGAGGATAAAAGTGGAGCAAAGTCGTCCTCTTCTTACATTCCCCGTTCAAGAAGACTAAGCTTGGAAGGTCCAAGAACCATAAAAAAAACATCCGCTGATGTAAACAAAACTTTACAGTTTGAACCAATGCCCCAACAGAAATATCATCCACAGCAAGATCCAGAAGCCGTATCAAAGCTAAATGGCCAATTGAGCAATGAGAGTTCCACATCAGCGCTGCATGCTAAAGTTCCTCCAAGTGCTACAAGCATCTACCCGAAGAGTTTGATAGAAGTTGATTATGCGGTCCAAACCCACCCTCATAAACTACCTCAAACACCTGAATCAACATTGTTAGATAAAAATGATTCAAACAGAATTGTGACAGGTGACCTTGCTGATTCCACAACAACAAAGGGAAAAGGGTCCCAGTTAAGAAGATCCCTGAGAACAATTGGCAAACTGATTAGTGGCCCTGATAAAAGAAGCCAACAAACTACGGTTGAAGTGAAATCACCTATCAAGGGAAGCATTCATGCAAGTCAGATGAAGTCTCCGGTAGCATCTAATGAGAGGACAAAAAGGAGGCAATCTTTAACAGGAATTTCATCTGGGCCCAGCAATAGCCGAAGATCCTCTCTTGGAGGGAAGCCAGACCCTGTAGCATATGAGAAGGAGAGAAATGCCAGAACGCCTCCTCCTGTTCGTTCAGAAAGCAAGACTGCAAAAAGGTGGCAATAG 3303 0.4111 MIMMENPSVSGVHDFNMASRKAGEAALRRYEATQWLESQVGSLGISKQPSERELVSCLRNGLILCKAINKIHPGAIPKIVDTQVPMQSLAWDSQPLPAYQYFENVRNFLNAAGELKLPAFEASDLEKESVENGSAGKIVDCILSLKCFHELKQMNNQSGTSKRLKSPLVMQSISRMQQGATTALPSEACRRLDLSAASEKKPPAESNFQTREGNMESLVKILVDRMLDAKENVDGKIVASICNGDLSLLQDPINLFNQVLTNCCGEQPSKKFPELPLLLKNFIKEGSSLPTNLTTKSTKSDVFSTPKSSKCYRACLGKCTCNHKLLIDIQKKELRDLKALKLRIKSEFEEMQSQFLNFFNDIGSQVNEMSAKAVGYHKVVEENRKLYNMVQDLKGNIRVYCRIKPAFRVESKNVVDFIGEDGSLFILDPSKTYGRKSFQFNRIFGPTASQDEVYRDTQPLIRSVMDGYNVCIFAYGQTGSGKTHTMSGPSGGTSKDMGINYLALNDLFHMSNEREAIIKYDIYVQMVEIYNEQFVFLTNLKLEIRSCNEDGLSLPDARLRSVKSTTDVMTLMKLGEVNRAVSCTAINNRSSRSHSVLTVHINGKDTSGNAIRSCLHLVDLAGSERVDKSEVTGDRLKEAQYINKSLSCLGDVITSLAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPEADSFGETVSTLKFAQRVSTVELGAARINKESSEVMQLKAQVENLKTQLANKENSKPMFNRTKEPRTPLEKTPLRPRRLSIENSSMSKTDKPVKAEDKSGAKSPSYIPRSRRLSLEGPRTIKKAADVNKTLQFEPMSQQKYHPRQDLEAAVSSLSGQLSNEKSISELHAEDKSGAKSSSSYIPRSRRLSLEGPRTIKKTSADVNKTLQFEPMPQQKYHPQQDPEAVSKLNGQLSNESSTSALHAKVPPSATSIYPKSLIEVDYAVQTHPHKLPQTPESTLLDKNDSNRIVTGDLADSTTTKGKGSQLRRSLRTIGKLISGPDKRSQQTTVEVKSPIKGSIHASQMKSPVASNERTKRRQSLTGISSGPSNSRRSSLGGKPDPVAYEKERNARTPPPVRSESKTAKRWQ* 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1726 1100 Coils Coil 720 747 - -
Psa3g1726 1100 PRINTS Kinesin heavy chain signature 467 488 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa3g1726 1100 PRINTS Kinesin heavy chain signature 584 601 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa3g1726 1100 PRINTS Kinesin heavy chain signature 614 632 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa3g1726 1100 PRINTS Kinesin heavy chain signature 663 684 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa3g1726 1100 Pfam Kinesin motor domain 433 712 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa3g1726 1100 PANTHER KINESIN-LIKE PROTEIN KLP-3 8 1088 - -
Psa3g1726 1100 MobiDBLite consensus disorder prediction 739 846 - -
Psa3g1726 1100 Gene3D Kinesin motor domain 391 754 IPR036961 -
Psa3g1726 1100 MobiDBLite consensus disorder prediction 891 907 - -
Psa3g1726 1100 MobiDBLite consensus disorder prediction 1009 1100 - -
Psa3g1726 1100 SUPERFAMILY Calponin-homology domain, CH-domain 29 158 IPR036872 -
Psa3g1726 1100 Gene3D - 20 150 IPR036872 -
Psa3g1726 1100 MobiDBLite consensus disorder prediction 749 769 - -
Psa3g1726 1100 MobiDBLite consensus disorder prediction 1012 1068 - -
Psa3g1726 1100 ProSiteProfiles Calponin homology (CH) domain profile. 26 150 IPR001715 GO:0005515
Psa3g1726 1100 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 396 747 IPR027417 -
Psa3g1726 1100 SMART ch_5 28 145 IPR001715 GO:0005515
Psa3g1726 1100 MobiDBLite consensus disorder prediction 858 936 - -
Psa3g1726 1100 Coils Coil 327 354 - -
Psa3g1726 1100 ProSiteProfiles Kinesin motor domain profile. 396 713 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa3g1726 1100 MobiDBLite consensus disorder prediction 917 936 - -
Psa3g1726 1100 PANTHER KINESIN-LIKE PROTEIN KIN-14L 8 1088 - -
Psa3g1726 1100 SMART kinesin_4 394 721 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa3g1726 1100 Pfam Calponin homology (CH) domain 28 146 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1726 Psa-Chr3 153479860 153487138 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1726 325 759 Calmodulin-binding Proteins AT5G65930 37.892 4.13e-70 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1726 K10406 - gmx:100786642 1201.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1726 3 153479860 153487138 Psa3g1726 3 153479860 153487138 ECH