Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1719 ATGAAAATAGCTTCTGACATAGTGAATGTGAAGTTACCTAGTGTGGAGGTAAGGTACAAGAACCTGAATGTAGAAGCAGAATGTGAGGTTGTTCAAGGGAAGCCACTTCCTACTCTATGGAATTCTTTTTCTAGCTTATTTTCAGATTTAGTGAAGACTATATCATGCAGTTCTCAAGAAACCAAATTGGGCATTCTTAAAGATGCCAGTGGCATCATAAAGCCGGCAAGGCTTACTCTTCTTCTGGGTCCACCTAGCTGTGGGAAAACTACCTTACTAATGGCATTGGCTGGAAAACTTGATCAATCTCTTGAGGCACATACATTGTCCGAGCGATTGGTGTCATCTTTGAGTACTCAAGGCACATACATTGTCCGAGAAGGAGATCCAGTTACCGAGATGCTTTTTATCATCAGAGGGAAACTCGAAAGCTCAACCACAAATGGTGGCAGAACTGGTTTCTTTAACTCTATTACCTTAAGGCCTGTTGAAGCCTTTGAACTTAGAGCAGAAGATCTTAAATTCGTGGCAAATCAGTTTCGACGTCTTCACAGCAAGAAGTTGCAGCATACGTTCCGTTTCTACTCTTACCATTGGAGGACATGGGCTGCTTGTTTCATTCAGGTCGCTTGGCGCCGGTTTAAGAAGAGAGTCTTGGCAAATAGCCTCAGCCTGAGAGAATACAAGTCCTTCATCGATGAACAAGCAAGAAATCGTATGGAACACGAGAAAGAAGAGCGCGGTAACACAACACAAGTAAAACAGAATCTTGGTGTCACTATATTGGCTTCAAGATTTGCTGCAAACACAAGGAAAGGGGTTCAGAAGATCAAGGATGTAGAGATGCTCAAGTTGCAAAAACCCGAAGAGCCAGATTTCTCACCGATTGCGAATGGAGCGTTTGTTCTTAGCATTGATACTGATTTTGATGGGTGTATGCAGTTGATTCGTGAAGTAACTGCTGAATTGCCTATTTATTTGGCTAATTCTCTGAACAGTTTGAGGCTTGAAGGACAGAAAACTGCTGCTATTGAGATTTTGCAGCAGTTTGATTGGCAGGTACCTGATTGGGTTATTGTACCTGGTGGGAATCTTGGGAATATTTATGCTTTTTATAAAGGGTTTCAGATGTGTAAAGAGTTAGGTCTTGTGGATAGAATTCCAAGGCTTGTTTGTGCTCAAGCTGCAAATGCAAATCCTTTGTATTTGTATTTTAAGTCGGGTTGGAAAGAGTTTAAGCCAGTTAGGGCACAGACAACTTTTGCATCTGCTATTCAGATTGGGGATCCTGTTTCTATTGATAGAGCTGTTCATGCTTTGAAGAACTGTAATGGTATCGTTGAGGAGGCTACTGAGGAAGAATTGATGGATGCTATGGCTCAGGCTGATTCGACTGGAATGTTTACTTGCCCTCACACTGGTGTTGCTTTGACTGCTTTGTTTAAGCTCAGGAATAGTGGTGTTATTAAGCCTACTGATAGGACTGTTGTTGTGAGCACTGCACATGGGTTGAAGTTTACTCAGTCCAAAATTGATTACCATTCAAAGAATATCAAAGACCTGGCTTGCCAATTTGCCAATCCTCCAATGCAGGTCAAGGCTGATTTTGGATCTGTTATGGATGTTTTGTCCAAGTATTTGCAGAGCAAGGCACCCAAGTATCATTAG 1668 0.4191 MKIASDIVNVKLPSVEVRYKNLNVEAECEVVQGKPLPTLWNSFSSLFSDLVKTISCSSQETKLGILKDASGIIKPARLTLLLGPPSCGKTTLLMALAGKLDQSLEAHTLSERLVSSLSTQGTYIVREGDPVTEMLFIIRGKLESSTTNGGRTGFFNSITLRPVEAFELRAEDLKFVANQFRRLHSKKLQHTFRFYSYHWRTWAACFIQVAWRRFKKRVLANSLSLREYKSFIDEQARNRMEHEKEERGNTTQVKQNLGVTILASRFAANTRKGVQKIKDVEMLKLQKPEEPDFSPIANGAFVLSIDTDFDGCMQLIREVTAELPIYLANSLNSLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYFKSGWKEFKPVRAQTTFASAIQIGDPVSIDRAVHALKNCNGIVEEATEEELMDAMAQADSTGMFTCPHTGVALTALFKLRNSGVIKPTDRTVVVSTAHGLKFTQSKIDYHSKNIKDLACQFANPPMQVKADFGSVMDVLSKYLQSKAPKYH* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1719 555 Pfam Pyridoxal-phosphate dependent enzyme 298 500 IPR001926 -
Psa3g1719 555 Gene3D - 301 553 IPR036052 -
Psa3g1719 555 PANTHER THREONINE SYNTHASE, CHLOROPLASTIC-LIKE ISOFORM X1 295 551 - -
Psa3g1719 555 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 297 547 IPR036052 -
Psa3g1719 555 SUPERFAMILY cAMP-binding domain-like 110 202 IPR018490 -
Psa3g1719 555 CDD Thr-synth_1 295 506 - -
Psa3g1719 555 CDD CAP_ED 100 195 IPR000595 -
Psa3g1719 555 Gene3D Jelly Rolls 101 162 IPR014710 -
Psa3g1719 555 ProSiteProfiles cAMP/cGMP binding motif profile. 96 143 IPR000595 -
Psa3g1719 555 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 103 IPR027417 -
Psa3g1719 555 PANTHER CYSTATHIONINE BETA-SYNTHASE 295 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1719 Psa-Chr3 153261747 153265438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1719 101 294 Ion Channels AT2G24610 59.414 1.29e-77 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1719 K01733 - gmx:100805303 487.263