Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1710 ATGGCTGAAACATTTTTGTTTGATATTGCTAATTCACTCTTAGGGAAGCTCGCTTCTTTTGCTTTTGATCAAGTTGCTCGTGCCTGTTACGTGTATCATGATCTTCAAGGGATCAAAGATACTCTCTCAATTATCACAACTCTTTTGTTGGATGCGGAGAAGAAGAAAAACCAGCAACCTACTTTGCGTGAATGGCTTAGGAAGATTCAAAGCATTTGCTCTGATGCTGAAGTTGTTTTGGACGAATTTCGTTTGCAAGTCAACCTAAAACAAGCTGTTGAAGGTTCTGGAAGCTCAAGGATGAAGGTACGCCGCTATGTTTCTTCCTCTAATCCAATTGCTTTCCGTTTTAGGATGGCACATCAAATTAAAGATATTAGAGGCAGATTGAATAAGGCTGCAGCCGATGGAGTCTGGTTTGGGCTTGTGAAAACTGATGTTGAGCCCAGACTTGCTGTGCAAAGTAGAGAAATTACTCATTCATATGTTGATATTTCAAGTGTAATTGGGAGGGAGAAAGATAAAGAAGCAATTATCCAGCTTTTGAAGCCAACTCATCCTCACACGGGTGGTGATCAAAGCCTATGTGTTATTCCCATTGTGGGTATTGGAGGCTTGGGAAAGACCACGCTTGCAAACTTCTTGTTCAATGATCAGAGGATCGATCAGCTTTTCCAACTAAAGATGTGGGTGTGTGTCTCTGATGATTTTGACCTCAGGAAGATTGTTATTAAAGTCATCAATTCTGCTTCTGATGCTTCTGCTGCTTCTACTTTCGATTCGGCTTCAAGTGTTGCTCACCAGGAGAATATAGACCACTTTGATATTGAGCGGCTACAAAGTCATCTGAGACGTAAACTTTCTGGTAAAACATTTTTACTAGTGTTAGATGACATATGGAATGATGATCGTGTAAAATGGATTGAGTTGAAAGATTTGTTAAAAGCCGGTACGTCAGGAAGTAAAATCTTGGCGACAACACGGAGCAACTTAGTTGCTTCGATGATGGGTACAGTTCCGTCCTATGTTTTAAAAGGTCTTGATACAAAGAAATGTTTATATCTGTTTCTCAAATGGGCTTTCAAGGAAGGAGAAGAAGAAAAGTATCCAAATCTAGTAGAGATCGGAAAAGAACTTGTGAAAAAATGCGCAGGGGTTCCACTAGCTGTGAGAACAATAGGAAGTTCTTTGTTTTCAAACTATGATTTGCACAAGTGGGAATTTGTAAGAGACCATGGATTATGGAATTCAGAAATGAAGAGAGGTGATATCCTACCAGCATTACAATTAAGCTATGATCAAATGCCATCCTATTTGAAGCAATGTTTTGCTTTTTTTTCCCTTTATCCCAAAGGTTTTACCTTCGATAGTGATGAAATTATAAATCTTTTTGCAGCCCTTGGGTTAGTTCAACCCCGAAATGGAAGTGAAAAGATAGAGAGTATTGTAAGAGAATATATAGATGAGTTAAATTCACGATCGTTTCTTGAGGAGTTCAGAGACTATGGCTACTGCTTCAAGTTCAAAGTACATGATTTGATACACGATCTTGCTATATATGTTGCGAGAGACGACTTTGTATTGGTAACCTCTGATACTCAAAGTATACCAGAGCAAGCAAGGCATTTATCAATTTTAGAAAATGTTTTACTTGACTATACTTTGATTCCAAAGTCCAAAAGAGTGAGAACTATATTATATCCTGTTCAAGGAGTGGGTCTTAAAAGTAAAAATCTTTTGCATACATGGATATTAAGATACAGATGCTTACTATACTTAGACTTAAGTAGTTCTTCATTTCAGACTCTGCCAACCTCAATTGCCAAATTGAAGCACCTGTGTGTTCTCTATATTCGAGATAACCACCAAATCAAAACACTTCCCCGCTCTATTTTCAAACTCCAAAGTTTGCAAGTTTTGTCCCTCACTGGATGCACAGAACTTGAAACATTGCCCGAAGGATTCGAGAAGTTGACAAGCCTTCGAAAACTGTATATAACCACAAAACAACTTTTTCTGTCACTGGATGAATTTGCAAGCTTGAATCATCTTCAAGCTTTGGGTTTATATCATTGTGACAATATGAAGCATTTGGTCAGCGGGGCACAAACACAACTCACTTCCCTTGAAGCATTGCATATTCAGTCTTGTAAGAGCTTGGAGTCTTTCCCTCTTCATATTTTCCCAAAATTGAATACTCTGCTAATTAAAGATTGTCCGACGTTCAACCTGTCGTTCAACTATGAAGGCCCAACCCAGAGGCAGAGATTGAGGTTGAAACATCTGCATCTTAAGAGTTTTCCACGGCTTTTGAAACTGCCTAGATGGATTGAAGATGCAGCAGAGACTTTAGAAAGCTTGAAAATTCGTAAGTTTCCAAATCTCAAGATGCTTCCTGAGTGTCTAACATTAATGACTCATCTCAATAGCCTCTATATTGAATCATGTCCTCAACTTGTGAGTCTTCCAAGTGACATGCACCGTCTTACTGCACTTGAAGAACTTCGCATTTATCGTTGTCCTGAATTGTGCCAAAAATGCCGGCCCCCATCTGGAGAGTACCGGCCCATGATTGGCCGCATCAAGCGAGTTTCCATTGGAAAACATTAA 2610 0.3916 MAETFLFDIANSLLGKLASFAFDQVARACYVYHDLQGIKDTLSIITTLLLDAEKKKNQQPTLREWLRKIQSICSDAEVVLDEFRLQVNLKQAVEGSGSSRMKVRRYVSSSNPIAFRFRMAHQIKDIRGRLNKAAADGVWFGLVKTDVEPRLAVQSREITHSYVDISSVIGREKDKEAIIQLLKPTHPHTGGDQSLCVIPIVGIGGLGKTTLANFLFNDQRIDQLFQLKMWVCVSDDFDLRKIVIKVINSASDASAASTFDSASSVAHQENIDHFDIERLQSHLRRKLSGKTFLLVLDDIWNDDRVKWIELKDLLKAGTSGSKILATTRSNLVASMMGTVPSYVLKGLDTKKCLYLFLKWAFKEGEEEKYPNLVEIGKELVKKCAGVPLAVRTIGSSLFSNYDLHKWEFVRDHGLWNSEMKRGDILPALQLSYDQMPSYLKQCFAFFSLYPKGFTFDSDEIINLFAALGLVQPRNGSEKIESIVREYIDELNSRSFLEEFRDYGYCFKFKVHDLIHDLAIYVARDDFVLVTSDTQSIPEQARHLSILENVLLDYTLIPKSKRVRTILYPVQGVGLKSKNLLHTWILRYRCLLYLDLSSSSFQTLPTSIAKLKHLCVLYIRDNHQIKTLPRSIFKLQSLQVLSLTGCTELETLPEGFEKLTSLRKLYITTKQLFLSLDEFASLNHLQALGLYHCDNMKHLVSGAQTQLTSLEALHIQSCKSLESFPLHIFPKLNTLLIKDCPTFNLSFNYEGPTQRQRLRLKHLHLKSFPRLLKLPRWIEDAAETLESLKIRKFPNLKMLPECLTLMTHLNSLYIESCPQLVSLPSDMHRLTALEELRIYRCPELCQKCRPPSGEYRPMIGRIKRVSIGKH* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1710 869 Pfam Rx N-terminal domain 11 98 IPR041118 -
Psa3g1710 869 Gene3D Ribonuclease Inhibitor 755 851 IPR032675 -
Psa3g1710 869 PRINTS Disease resistance protein signature 197 212 - -
Psa3g1710 869 PRINTS Disease resistance protein signature 286 300 - -
Psa3g1710 869 PRINTS Disease resistance protein signature 383 397 - -
Psa3g1710 869 PRINTS Disease resistance protein signature 632 648 - -
Psa3g1710 869 Gene3D - 431 520 IPR036388 -
Psa3g1710 869 Gene3D - 10 124 - -
Psa3g1710 869 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 445 IPR027417 -
Psa3g1710 869 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 760 - -
Psa3g1710 869 PANTHER DISEASE RESISTANCE PROTEIN RP 6 760 IPR044974 GO:0006952
Psa3g1710 869 Pfam Leucine rich repeat 612 667 IPR001611 GO:0005515
Psa3g1710 869 CDD RX-CC_like 11 130 IPR038005 -
Psa3g1710 869 Gene3D - 346 430 IPR042197 -
Psa3g1710 869 Pfam NB-ARC domain 190 433 IPR002182 GO:0043531
Psa3g1710 869 Gene3D Ribonuclease Inhibitor 534 743 IPR032675 -
Psa3g1710 869 Gene3D - 152 341 IPR027417 -
Psa3g1710 869 SUPERFAMILY L domain-like 509 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1710 Psa-Chr3 152848793 152851402 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1710 198 843 WRKY Transcription Factor Family AT5G45050 21.545 7.25e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1710 - - mtr:MTR_7g091550 1056.97