Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1703 ATGGAAGGAGTAGGGTTATTGGAATGTGGAAGAAAGTGCACTCCATCGCCTTTCTTGTTGAAGACATACATGTTGGTGGAGGATCCGGGGACCGACGAGGTGATATCGTGGAACGACGATGGAGCGGCGTTCGTGGTGTGGCAGCCGGCGGAGTTTGCTCGTGATCTTCTTCCGACACTCTTCAAGCATAGCAATTTCTCTAGCTTTGTACGCCAACTCAATACTTATGGGTTTCGTAAAGTTGCAACAAGTAGATGGGAATTTTGCAATGAAAGATTCAAGAAAGGTGAAAGAGAGTTACTATCTGAGATTCGGCGAAGAAAAGCTTGGAGCAACAAGCAACAACGCTCGGTACAAAACCAAGATTCTGATGAAGATCAAAGGTCATCATCAACCTCTTCAACTTCCGGTTACAGTAATCTTTTGGATGAAAACAAGCGACTGAAGAAGGAAAATGTGGTGTTGAATTCTGAGTTAACAAGCATGAAAAGGAAGTGTAAGGAGTTACTTGATTTGGTATCAGTTTATAACAAAAAACAGGAAGAGGAAAAAGGTAAAGATGATGATGAAAGGCCAATGCTGTTTGGAGTGAGATTGGATGTTCAACAAGGAGAGAGAAAGATCAAAAGGAATAGAGGTGAGATTAGTGAAAGTGCAAGCATTTTGTTGTCACAATCATGCAAATAG 687 0.4192 MEGVGLLECGRKCTPSPFLLKTYMLVEDPGTDEVISWNDDGAAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFCNERFKKGERELLSEIRRRKAWSNKQQRSVQNQDSDEDQRSSSTSSTSGYSNLLDENKRLKKENVVLNSELTSMKRKCKELLDLVSVYNKKQEEEKGKDDDERPMLFGVRLDVQQGERKIKRNRGEISESASILLSQSCK* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1703 228 Pfam HSF-type DNA-binding 18 107 IPR000232 GO:0003700|GO:0006355|GO:0043565
Psa3g1703 228 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 5 228 IPR027725 -
Psa3g1703 228 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-3 5 228 - -
Psa3g1703 228 SMART hsfneu3 14 107 IPR000232 GO:0003700|GO:0006355|GO:0043565
Psa3g1703 228 PRINTS Heat shock factor (HSF) domain signature 18 41 IPR000232 GO:0003700|GO:0006355|GO:0043565
Psa3g1703 228 PRINTS Heat shock factor (HSF) domain signature 56 68 IPR000232 GO:0003700|GO:0006355|GO:0043565
Psa3g1703 228 PRINTS Heat shock factor (HSF) domain signature 69 81 IPR000232 GO:0003700|GO:0006355|GO:0043565
Psa3g1703 228 SUPERFAMILY "Winged helix" DNA-binding domain 15 107 IPR036390 -
Psa3g1703 228 Coils Coil 138 165 - -
Psa3g1703 228 MobiDBLite consensus disorder prediction 113 141 - -
Psa3g1703 228 Gene3D - 10 109 IPR036388 -
Psa3g1703 228 MobiDBLite consensus disorder prediction 112 141 - -
Psa3g1703 228 ProSitePatterns HSF-type DNA-binding domain signature. 57 81 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1703 Psa-Chr3 152505672 152508139 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1703 15 176 HSF AT2G41690 60.556 1.37e-69 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Psa3g1703 HSF_DNA-bind 2.5e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1703 K09419 - gmx:100802739 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1703 3 152505672 152508139 Psa3g1703 3 152505672 152508139 ECH