Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1702 ATGTCCTTTTCGCTTCCATTTCCTAGGGTTTTTGCAACCATGGGAACTGCTTCGCGGCAGTTCAAGATTATGCTCAGAAAGAACTGGCTCCTCAAAATTCGTCATCCTTTCGTTACTGCTGCTGAGATTTTGCTCCCTGCGATTGTGTTGTTGCTATTAGCAGCCGTGAGAACAAGAGTGGATACACAGATTCATCCAGCTCAATCGCACATTCAAAAAGATATGTTTGTAGAAGTGGGGAAAGGCATATCCCCTAATTTCCCACAAGTTTTGGAGTCCTTATTGGATAAGAGAGAGTATTTAGCTTTTGCACCAGACACCAGTGAAACAAGGATGATGATAGATGTGCTGTCGATCAAATTTCCGATTTTGAAGCTTGTTAGTATTGTGTACCAAGATGAGTTGGAGTTGGAAACGTACATCCGGTCAGATGCTTATGGTACTTGCAATGACGTAAGGAATTGTTCAAATCCTAAAATTAAAGGGGCAGTTGTATTTTATGAACAAGGTCCTCAGTCATTTGATTATAGTATACGCCTCAATCATACATGGGCTTTCTCCGGTTTTCCGGACGTTACAACAATAATGGATACAAATGGCCCTTTTCTCAATGACTTGGAACTTGGTGTTAGTGCTATACCAACAATGCAATACAGCTTCAGTGGGTTTTTGACACTCCAACAAATGGTTGATTCGTTTATATTATTTATAGCTCAACAACCTGAATTAAACTCAAATGCTGAAACTGTAAAGCTCCCTCTTCTAGGATACAATGACACTGATTTCTCCCTAAAAGTTCCATGGACTCAGTTTAACCCTACTAACATACGAATAGCTCCATTTCCCACTCGAGAGTACACTGATGACCAATTCCAGGCAATAGTGAAGAAAGTCATGGGAATATTGTATTTATTGGGGTTTCTCTATCCAGTTTCTCGCCTGATAAGTTATTCTGTGTTTGAGAAGGAACAAAAGATCAAAGAAGGACTCTATATGATGGGCTTAAAAGATGGCATATTTCATCTCTCTTGGTTTATCACATATGCTTTGCAGTTTGCAATTTCTTCTGCGGTCATTACAACTTGCACCATGGATAATATATTCAAATATAGTGATAAGACACTGGTGTTTGCATACTTCTTCATTTTTGGGCTTAGTGCAATCATGCTGTCATTTTTGATATCCACCTTTTTCAAAAGGGCCAAAACAGCTGTAGCTGTTGGAACTCTATCATTTCTTGGTGCCTTTTTCCCTTATTACACTGTCAACGATGAGGGAGTCTCTATGATCTTGAAGGTTCTTGCTTCTCTACTTTCACCTACCGCATTTGCTCTGGGTTCTGTCAACTTTGCTGATTATGAGCGTGCTCATGTTGGGCTTCGTTGGAGCAACATATGGCGTGAGTCCTCTGGTGTGAACTTTTCCGCATGTCTTCTAATGATGATACTTGATACACTGCTCTATTGTGCAATTGGACTGTATTTCGATAAGGTTCTTCCAAGGGAGTATGGACTGCAATATCCATGGAACTTTATTTTCAAAAAAGACTTCTGGAGAAAGAAAAAAATTGTAAATGATTGTTCCTCCAGTTTTAAAGTTAAAATTACCGGTAATAGTTCAGAGCCAGAAAGGAATCTTTTGGGGCAAGATACTGCAAATCCTGCTATAGAAGCAATAAGCTTAGACATGAAACAACAGGAGCTTGATGGCAGGTGCATTCAAATCAGGAATTTGCATAAAGTGTATGATACTAAAAAAGGAGATTGCTGTGCTGTTAACTCATTACAACTGACATTATATGAAAATCAGATTCTTGCTCTTCTAGGACATAATGGTGCTGGGAAAAGCACGACAATATCAATGCTTGTTGGTCTTCTTCCTCCTACTTCTGGGGATGCTTTGATTTTTGGAAAGAACATTGTCTCTGATATTGATGAGATACGGAAGGTTTTGGGTGTCTGTCCACAACATGATATACTCTTTCCTGAATTGACCGTGAGAGAGCATTTAGAGTTATTTGCTATATTAAAGGGTGTGGAGGAAGACACTCTGGAGAGCGTTATTATTAATATGGTTGATGAGGTGGGCCTGGCTGATAAAATCAACACTGTTGTGAGATCTCTTTCTGGTGGCATGAAGAGGAAGTTGTCTCTTGGAATCGCATTAGTTGGAAACAGTAAGGTTATAATTCTTGACGAGCCTACAAGTGGAATGGATCCATATTCAATGCGATTGACTTGGCAGTTAATAAAAAAAATCAAGAAGGGCAGAATAATTTTGCTTACAACACATTCCATGGACGAAGCAGATGAACTAGGTGACCGGATAGCTATCATGGCCAATGGTTCTCTGAAATGCTGTGGAAGCTCCCTTTTCTTGAAGCATCATTATGGAGTTGGTTACACTTTAACTCTCGTAAAGTCTGCTCCTACTGCTTCTATAGCTGGTGATATTGTATACCGATATATTCCAACAGCAACCTGTATAAGTGAGGTTGGAACGGAGATTTCCTTCAGACTCCCTATGGCATCCTCCTCAACCTTTGAGAGGATGTTCAGGGAAATTGAAGGTTGCATGAAAAGGCCAGTTTTAAGCATGGAAATAAGTGGCAGTTGTGAAAAAGACAGTCATGGTATTGAAAGTTATGGTATATCTGTAACAACCCTGGAGGAGGTATTCTTGAGAGTTGCTGGATGTGACTATGAAGTTGAATGCTCTGAAGAAACTCACCACTCCCTTATATCAGAACCTATAGTTTCTCTTACTTCTGCTAATCGTTCATCCACAGGAATATGTTATTATAAAGTTTTTGGAAATTATAAGAAGATTATTGGTTTCATGTCTACGGTGGTGGGGAGAGCTTGTGATTTAATATTTGATGCAGTTATTAGTTTTATCAACTTCGTAGGCATGCAGTGTTGTTGCTGTTGTCTCATTACTACGTCCACTTTTTGGCAACATTCTAAAGCTTTATTTATTAAGAGGGCAATATCTGCTCGCAGAGATCACAAAACAATTATGTTTCAACTAATAATTCCCGCTCTCTTCTTGTTTATTGGTCTTTTATTTATGGAGCTCAAGCCACATCCTGATCAGATATCACTGACTCTTTCAACTTCTAATTTTAATCCTCTATTGAGCGGTGGGGGTGGGGGTGGTCCAATTCCGTTTAACCTATCTTTTCCAATTGCAGAAAAGGTAGCACAAAATGTCAAAGGAGGTTGGATTCAAAGTTGCAACCCAAGCTCATATAAATTTCCCAATTCAGAAAAGGCATATGCTGATGCAGTGGAAGCAGCAGGGCCAACTTTGGGACCTGCTCTACTTTCAATGAGTGAATATTTGATGTCTAGCTTTAATGAGTCCTACCAATCTAGGTATGGGGCAATTGTGATGGATGATCAAAACACTGATGGAAGCTTAGGCTACACTGTATTACACAACTTTTCTTGTCAGCATGCTGCTCCCACCTTTATCAATTTGATGAATTCTGCAATTCTTGGGCTTGCTACTCATGACATGAAAGTATTACACAACTTTTCTTGTCAGCATGCTGCTCCCACCTTTATCAATTTGATGAATTCTGCAATTCTTGGGCTTGCTACTCATGACATGAATGCCACAATTCAGACACGCAACCACCCTCTACCAATGACACAAAGCCAACACTTACAACGTCATGATCTGGATGCTTTCTCTGCGGCCATCATTGTCAACATAGCCTTCTCTTTCATTCCTGCCTCATTTGCTGTTTCAATTGTTAAGGAACGTGAAGTGAAAGCTAAGCATCAACAACTAATCAGTGGGGTTTCAGTCCTTTCATATTGGACCTCTACATTTATTTGGGACTTCGTGAGCTTCTTGTTTCCGGCCTCATTTGCCATAGTTCTCTTTTACATCTTTGGTCTGGATCAGTTTGTTGGGGAAGTTTCTTTGTTTCCAACTATCATCATGCTTTTGGAATATGGACTTGCAAGTGCATCGTCAACTTATTGCCTTACATTTTTCTTTTTTGACCACACTGTGGCTCAGAATGTGGTTCTCCTGGTCCACTTTTTTTCTGGATTGATACTAATGGTTATCTCATTCGTTATGGGACTCATCCCATCCACATTAAGCGCCAATTCGTTTCTTAAGAACTTTTTCAGAATATCTCCTGGATTTTGTTTTGCTGACGGACTTGCTTCATTAGCTCTTCTGCGGCAAGGAATGAAAGATAAAACAAGTGATGGAGTGTATGACTGGAATGTTACGGGTGCCTCCATTTGTTATCTTGCTGTTGAGAGCGTTGTTTATTTTTCATTGACACTCGGGCTTGAAATTTTTCCTTCCCTCAAATTGACTCCGTTCATGATCAAGAAGTGGTGGGGGGAAATTAATATCTTCCCACGTAATTCTACTTATCTGGAACCTTTATTAGAACCTCCTGAAACTTTTGTCACGGACCTCAACGAAGATGTGGATGTGAAAACAGAAAGAAATAGAGTACTCTCAGGCTCTGTTGACAATGCCATTATCTACTTGCGCAATCTTCGCAAGGTGTATTCTGAAGAGAAGAAACATGGAAAAAAGGTTGCAGTAGATTCATTAACCTTCTCAGTTCAGGAAGGAGAATGTTTTGGCTTTTTAGGAACAAATGGAGCTGGAAAGACCACAACACTTTCTATGTTATGCGGGGAAGAATCTCCTTCTGACGGGACTGCTTTTATTTTTGGCAAAGACATATGTTCCCATCCCAAGGCTGTTCGTAAATATATTGGGTATTGTCCACAATTTGATGCTCTGTTGGAGTTCTTAACTGTAAAAGAGCATCTTGAGCTATATGCTAGAATAAAAAGTGTTTCAGACTACACAATAGACAATGTTGTTATGGAAAAGTTGGTAGAGTTTGACTTATTGAAGCATGCTAATAAACCATCATTTTCACTTAGTGGAGGGAATAAAAGAAAACTATCTGTTGCTATTGCAATGATTGGCGATCCTCCTATTGTCATTCTTGATGAACCATCCACAGGAATGGATCCCATTGCCAAAAGGTTCATGTGGGATGTAATATCTAGAATCTCAACTAGACGAGGAAAGACTGCAGTTATTCTTACTACCCATAGCATGAATGAAGCTCAAGCCTTGTGTACCAGAATAGGGATTATGGTTGGTGGACAACTAAGATGTATTGGAAGCCCGCAGCATCTAAAGACAAGATTTGGAAATCATCTAGAACTAGAGGTAAAACCCACTGAAGTGAGTTCTGTGGACTTGCAAGCACTCTGCCAAGCTATTCAGGAAATGCTTTTTGATGTCCCTTCTCAACCTAGAAGCTTAATTAATGACCTTGAAATTTGCATTGGGGGTGCTGATTCTGCCTCCTCAGGAAATACCTCCATTGCAGAGATTAGCTTGACACCAGATATGATAGGCTTAATTGGACGATGGCTTGGCAACGAAGAAAGAGTGAAGACTCTAATGTGCAGTACACCTGTCTATGACGGGGCCTCTCAGGAACAGTTATCCGAACAATTATTTCGAGATGGTGGTATCCCATTGCCAGTGTTTTCTGAATGGTGGTTGTCCAAACAAAAATTCTCAGAAATTGATTCATTTATTCTCTCTTCGTATCGTGGAGCAAGATGCCAAGGATACAATGGTTTAAGCATCAGATACCAGTTACCTTGTGATGAGGAGTTTTCCCTGGCAGATGTTTTTGGACTTCTTGAAGCAAGCAGAGATAGGTTAGGGATTGCAGAGTACAGCCTCAGCCAATCAACTCTGGAGACAATATTCAATCATTTTGCAGCTAATTCGTGA 5805 0.3995 MSFSLPFPRVFATMGTASRQFKIMLRKNWLLKIRHPFVTAAEILLPAIVLLLLAAVRTRVDTQIHPAQSHIQKDMFVEVGKGISPNFPQVLESLLDKREYLAFAPDTSETRMMIDVLSIKFPILKLVSIVYQDELELETYIRSDAYGTCNDVRNCSNPKIKGAVVFYEQGPQSFDYSIRLNHTWAFSGFPDVTTIMDTNGPFLNDLELGVSAIPTMQYSFSGFLTLQQMVDSFILFIAQQPELNSNAETVKLPLLGYNDTDFSLKVPWTQFNPTNIRIAPFPTREYTDDQFQAIVKKVMGILYLLGFLYPVSRLISYSVFEKEQKIKEGLYMMGLKDGIFHLSWFITYALQFAISSAVITTCTMDNIFKYSDKTLVFAYFFIFGLSAIMLSFLISTFFKRAKTAVAVGTLSFLGAFFPYYTVNDEGVSMILKVLASLLSPTAFALGSVNFADYERAHVGLRWSNIWRESSGVNFSACLLMMILDTLLYCAIGLYFDKVLPREYGLQYPWNFIFKKDFWRKKKIVNDCSSSFKVKITGNSSEPERNLLGQDTANPAIEAISLDMKQQELDGRCIQIRNLHKVYDTKKGDCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLLPPTSGDALIFGKNIVSDIDEIRKVLGVCPQHDILFPELTVREHLELFAILKGVEEDTLESVIINMVDEVGLADKINTVVRSLSGGMKRKLSLGIALVGNSKVIILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLKHHYGVGYTLTLVKSAPTASIAGDIVYRYIPTATCISEVGTEISFRLPMASSSTFERMFREIEGCMKRPVLSMEISGSCEKDSHGIESYGISVTTLEEVFLRVAGCDYEVECSEETHHSLISEPIVSLTSANRSSTGICYYKVFGNYKKIIGFMSTVVGRACDLIFDAVISFINFVGMQCCCCCLITTSTFWQHSKALFIKRAISARRDHKTIMFQLIIPALFLFIGLLFMELKPHPDQISLTLSTSNFNPLLSGGGGGGPIPFNLSFPIAEKVAQNVKGGWIQSCNPSSYKFPNSEKAYADAVEAAGPTLGPALLSMSEYLMSSFNESYQSRYGAIVMDDQNTDGSLGYTVLHNFSCQHAAPTFINLMNSAILGLATHDMKVLHNFSCQHAAPTFINLMNSAILGLATHDMNATIQTRNHPLPMTQSQHLQRHDLDAFSAAIIVNIAFSFIPASFAVSIVKEREVKAKHQQLISGVSVLSYWTSTFIWDFVSFLFPASFAIVLFYIFGLDQFVGEVSLFPTIIMLLEYGLASASSTYCLTFFFFDHTVAQNVVLLVHFFSGLILMVISFVMGLIPSTLSANSFLKNFFRISPGFCFADGLASLALLRQGMKDKTSDGVYDWNVTGASICYLAVESVVYFSLTLGLEIFPSLKLTPFMIKKWWGEINIFPRNSTYLEPLLEPPETFVTDLNEDVDVKTERNRVLSGSVDNAIIYLRNLRKVYSEEKKHGKKVAVDSLTFSVQEGECFGFLGTNGAGKTTTLSMLCGEESPSDGTAFIFGKDICSHPKAVRKYIGYCPQFDALLEFLTVKEHLELYARIKSVSDYTIDNVVMEKLVEFDLLKHANKPSFSLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNHLELEVKPTEVSSVDLQALCQAIQEMLFDVPSQPRSLINDLEICIGGADSASSGNTSIAEISLTPDMIGLIGRWLGNEERVKTLMCSTPVYDGASQEQLSEQLFRDGGIPLPVFSEWWLSKQKFSEIDSFILSSYRGARCQGYNGLSIRYQLPCDEEFSLADVFGLLEASRDRLGIAEYSLSQSTLETIFNHFAANS* 1935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1702 1934 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 18 1361 IPR026082 GO:0016021|GO:0055085|GO:0140359
Psa3g1702 1934 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1360 1930 IPR026082 GO:0016021|GO:0055085|GO:0140359
Psa3g1702 1934 ProSitePatterns ABC transporters family signature. 1643 1657 IPR017871 GO:0005524
Psa3g1702 1934 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 573 806 IPR003439 GO:0005524
Psa3g1702 1934 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1505 1735 IPR027417 -
Psa3g1702 1934 CDD ABC_subfamily_A 573 794 - -
Psa3g1702 1934 Pfam ABC transporter 593 736 IPR003439 GO:0005524
Psa3g1702 1934 Pfam ABC transporter 1528 1670 IPR003439 GO:0005524
Psa3g1702 1934 ProSitePatterns ABC transporters family signature. 708 722 IPR017871 GO:0005524
Psa3g1702 1934 Gene3D - 560 809 IPR027417 -
Psa3g1702 1934 Gene3D - 1497 1748 IPR027417 -
Psa3g1702 1934 CDD ABC_subfamily_A 1506 1732 - -
Psa3g1702 1934 SMART AAA_5 601 783 IPR003593 -
Psa3g1702 1934 SMART AAA_5 1536 1722 IPR003593 -
Psa3g1702 1934 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1506 1744 IPR003439 GO:0005524
Psa3g1702 1934 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 570 811 IPR027417 -
Psa3g1702 1934 Pfam ABC-2 family transporter protein 269 494 - -
Psa3g1702 1934 Pfam ABC-2 family transporter protein 1004 1437 - -
Psa3g1702 1934 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 18 1361 - -
Psa3g1702 1934 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 1360 1930 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1702 Psa-Chr3 152446685 152500088 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1702 573 809 Calmodulin-binding Proteins AT2G36910 25.506 1.41e-16 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1702 K05643 - gmx:100803263 3243.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1702 3 152446685 152500088 Psa3g1702 3 152446685 152500088 ECH