Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1690 ATGGAAATTCTGTGCTTGTTGTATATTGTGTTGGGTTTGTATCTTTCAGTTGGTGAGTTTGTTGGTGCTGAGTTACAAGACCAAGCTATAATACATGCCATCAATCAAGAGCTTAGAGTTCCTGAATGGAGTGATGCAAACATTTCTGATTACTGTACATGGCAAGGGGTTTTATGTGGCAATCATTCAATGGTGGAGAAGCTTGATCTTTCTCACAGAAGCCTTAGAGGTAATGTGAGTTTAATCTCTGAGCTCAAAAGTTTGAAGTTGCTTGATCTTTCTAATAATAACTTTGGTGGATTGATTCCTCTTGCTTTTGGAGATTTGTCTGAGCTTGAAATTCTAGATTTGTCTTCTAATAAGTTTGAAGGTTCGATTCCATCACAGTTTGGTGATCTCAGAAGCTTAAAATCGTTGAACATTTCTAATAATTTGCTTGTTGGTGAGTTACCAATGGAACTTCATGGTTTAAAGAAATTGCAGGATTTGCAACTTTCTAGTAATCAGTTGAGTGGTTTTATACCTTCTTGGGTGGGGAATTTAACCGATTTGAGAGTTTTTTCGGCGTATGAGAATCGTTTAGATGGTAGGATTCCAGATAATCTAGGCTTGATTCCTGAACTTCAGATACTTAACTTGCACTCTAACCAGCTTGAAGGTCCAATACCAGCGAGCATTTTCGCTTCGGGGAAGCTAGAAGTTCTGGTTCTCACTCAGAATAATTTTAGTGGTGATCTTCCGGAGGAAATTGGGAACTGTCGTGGCCTTTCAAGCGTTAGAATTGGAAACAACCATCTCGTAGGTGCTATTCCGAAGACCATTGGAAATCTTAGTAGCCTAACATATTTCGAAGCCGATAATAATAATCTTTCTGGTGAGTTAGTATCGGAGTTTGCACGGTGTTCTAATCTCACCCTTTTGAATTTAGCTTCAAATGGATTTTCTGGGATGATTCCACAAGAGTTTGGACAACTTATGAATCTTCAGGAATTGATTTTGTCTGGAAATGGCCTATTTGGTGATATTCCAAAACCAATTCTCAGTTGTAAAAGCCTCAACAAGCTTGATATAAGCAACAACAGATTCAATGGGACGATACCGAATGAAATCTGCAATATTTCTCGGTTGCAGTACTTGTTATTGAATCTGAATTCTATAAGAGGAGAGATCCCTCATGAAATTGGAAGCTGTGCAAAACTCCTTGAATTACAGTTGGGGAGTAATTATTTGACTGGAACTATTCCTCCCGAGATCGGTCGCATCAGGAACTTACAGATAGCTTTGAATTTGAGCTTCAATCATCTCCACGGGCCACTGCCACCGGAATTGGGTAAACTGGACAAACTTGTTTCTCTCGATGTTTCCAATAATCGGTTATCAGGTAATATCCCAACCGAGCTTAAGGGAATGTTGAGCTTGATAGAGGTGAATTTCTCGAATAATCTATTTGGAGGTCCTGTACCGACATTTGTACCGTTCCAGAAGAGTCCTACTTCGAGTTTTTTAGGAAATAAAGGGCTCTGTGGAGATCCATTGAACTCTTCATGTGGAAATATTTATGATGATCACGGTAGTTACCATCACAAGGTTTCTTACAGAATCGTATTGGCAGTTATCGGTTCTGGTTTGGCAGTTTTTATGTCAGTAACTATAGTTGTCTTGCTGTTTATGATCAGAGAGAGGCAAGAAAAAGCAGCTAAAGAAGCTGCCGGTATTGTTGATGATCCAACTGATGATAAACCAACTATCATAGCAGGGACGGTTTTTGTCGATAATCTACAACAAGCGATAGACCTCGACGCTGTTGTTAATGCAACTTTGAAAGACTCGAATAAACTCAGCAGCGGAACTTTCAGCTCAGTTTACAAAGCAACCATGCCTTCTGGTGTGGTTTTATCTGTCAGGAGACTGAAATCTGTGGACAAGACAATAATCCACCATCAGAACAAGATGATTCGAGAACTCGAAAGGCTAAGCAAAGTATGTCACGATAATCTCGTGCGACCTATAGGCTATGTCATTTACGAAGATGTTGCTCTTCTCTTGCATAATTATTTTCCTAATGGAACATTGTCTCAGCTTCTTCATGAATCTACCAAGCAACCTGAATATCAGCCTGATTGGCCAGCTAGGCTATCCATCGCCATCGGTGTCGCAGAAGGTTTGGCTTTCCTTCATCATGTGGCAATTATCCATCTTGACATTTCTTCTGGCAATGTTCTTTTGGATGCAAACTTCAAGCCATTGGTTGGAGAGATTGAGATTTCAAAACTTCTCGATCCAACCAGAGGAACCGGAAGTATTAGTGCAGTTGCCGGTTCCTTCGGCTACATACCTCCAGAATATGCATACACCATGCAAGTGACAGCGCCGGGAAATGTTTACAGCTATGGCGTTGTTTTGTTGGAAATCCTTACATCTCGACAACCTGTTGAAGAAGATTTCGGCGAAGGTGTAGATTTGGTCAAGTGGGTTCAAAGTGCTCCTGTAAGAGGCGAAACTCCAGAGCAGATACTTGATGCGAGGCTTAGCACAGTTTCCTTCGGTTGGAGGAAAGAAATGCTCGCTGCTCTAAAGGTTGCGTTGCTCTGCACCGACGGCACACCAGCCAAACGGCCGAAAATGAAGAATGTAATTGAAATGCTTAGAGAAATTAAGTAA 2661 0.4085 MEILCLLYIVLGLYLSVGEFVGAELQDQAIIHAINQELRVPEWSDANISDYCTWQGVLCGNHSMVEKLDLSHRSLRGNVSLISELKSLKLLDLSNNNFGGLIPLAFGDLSELEILDLSSNKFEGSIPSQFGDLRSLKSLNISNNLLVGELPMELHGLKKLQDLQLSSNQLSGFIPSWVGNLTDLRVFSAYENRLDGRIPDNLGLIPELQILNLHSNQLEGPIPASIFASGKLEVLVLTQNNFSGDLPEEIGNCRGLSSVRIGNNHLVGAIPKTIGNLSSLTYFEADNNNLSGELVSEFARCSNLTLLNLASNGFSGMIPQEFGQLMNLQELILSGNGLFGDIPKPILSCKSLNKLDISNNRFNGTIPNEICNISRLQYLLLNLNSIRGEIPHEIGSCAKLLELQLGSNYLTGTIPPEIGRIRNLQIALNLSFNHLHGPLPPELGKLDKLVSLDVSNNRLSGNIPTELKGMLSLIEVNFSNNLFGGPVPTFVPFQKSPTSSFLGNKGLCGDPLNSSCGNIYDDHGSYHHKVSYRIVLAVIGSGLAVFMSVTIVVLLFMIRERQEKAAKEAAGIVDDPTDDKPTIIAGTVFVDNLQQAIDLDAVVNATLKDSNKLSSGTFSSVYKATMPSGVVLSVRRLKSVDKTIIHHQNKMIRELERLSKVCHDNLVRPIGYVIYEDVALLLHNYFPNGTLSQLLHESTKQPEYQPDWPARLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDANFKPLVGEIEISKLLDPTRGTGSISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTSRQPVEEDFGEGVDLVKWVQSAPVRGETPEQILDARLSTVSFGWRKEMLAALKVALLCTDGTPAKRPKMKNVIEMLREIK* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1690 886 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 886 - -
Psa3g1690 886 Pfam Protein tyrosine and serine/threonine kinase 610 881 IPR001245 GO:0004672|GO:0006468
Psa3g1690 886 ProSiteProfiles Protein kinase domain profile. 607 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g1690 886 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE TYROSINE-PROTEIN KINASE PXC3 1 886 - -
Psa3g1690 886 SUPERFAMILY L domain-like 192 525 - -
Psa3g1690 886 CDD STKc_IRAK 613 885 - -
Psa3g1690 886 Gene3D Ribonuclease Inhibitor 28 135 IPR032675 -
Psa3g1690 886 Gene3D Phosphorylase Kinase; domain 1 579 685 - -
Psa3g1690 886 Gene3D Ribonuclease Inhibitor 231 518 IPR032675 -
Psa3g1690 886 Pfam Leucine rich repeat 87 146 IPR001611 GO:0005515
Psa3g1690 886 Gene3D Transferase(Phosphotransferase) domain 1 686 886 - -
Psa3g1690 886 SMART LRR_typ_2 325 349 IPR003591 -
Psa3g1690 886 SMART LRR_typ_2 85 108 IPR003591 -
Psa3g1690 886 SMART LRR_typ_2 157 181 IPR003591 -
Psa3g1690 886 SMART LRR_typ_2 446 469 IPR003591 -
Psa3g1690 886 SMART LRR_typ_2 373 397 IPR003591 -
Psa3g1690 886 SMART LRR_typ_2 109 132 IPR003591 -
Psa3g1690 886 SMART LRR_typ_2 205 229 IPR003591 -
Psa3g1690 886 ProSitePatterns Tyrosine protein kinases specific active-site signature. 730 742 IPR008266 GO:0004672|GO:0006468
Psa3g1690 886 SUPERFAMILY Protein kinase-like (PK-like) 607 883 IPR011009 -
Psa3g1690 886 Gene3D Ribonuclease Inhibitor 152 230 IPR032675 -
Psa3g1690 886 SUPERFAMILY L domain-like 37 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1690 Psa-Chr3 150080313 150083923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1690 1 886 Receptor kinase-like Gene Family AT2G41820 72.748 0.0 1301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa3g1690 PK_Tyr_Ser-Thr 5.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1690 - - adu:107492611 1496.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1690 3 150080313 150083923 Psa3g1690 3 150080313 150083923 ECH