Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1684 ATGGAAGCAGTAGCAGCAGCCATTACAGAAAACAACAATCAAACTTATGATTCTTTCTGCTTGACAAATGCGATAAATAATAACATGAAAGTGAATAGCACGGATCCTTTGAATTGGGGCGCGGCAGCGGAGACAATGAAAGGAAGTCACCTGGATGAGGTGAAACGTATGGTGGAAGAGTATCGGAAGCCGGTGGTACGTCTTGGTGGCGAGACGCTGACGATTTCTCAGGTGGCTGCCATTGCCGCACACGACCACGGCGTGAAGGTGGAGTTGTCGGAATCTGCAAGAGCCGGTGTTAAGGCCAGCAGTGACTGGGTGATGGAGAGTATGAATAAAGGCACAGACAGTTATGGTGTCACCACCGGTTTCGGTGCAACCTCACATCGCCGCACCAAACAAGGTGGTGCTCTGCAGAAAGAACTCATCAGATTTTTGAATGCTGGAATATTTGGAAATAGAACTGAGTCAAACCACACACTACCGCACACAGCAACAAGAGCCGCTATGTTAGTGCGAATCAACACACTTCTCCAAGGCTATTCAGGCATTAGATTTGAGATCTTAGAAGCGATAACCAAGCTTATTAACAACAATATTACTCCTTGTTTGCCGCTTCGAGGTACAATCACAGCTTCAGGAGATTTAGTCCCTTTATCTTACATTGCTGGTTTACTAACCGGAAGACCGAATTCGAAAGCTCATGGACCCTCCGGAGAGATACTTAATGCAAAAGAAGCTTTTCAAATGGCTGAAATCAATGCTGATTTCTTTGAATTACAACCAAAAGAAGGTCTTGCACTTGTTAATGGAACTGCTGTTGGTTCTGGTTTAGCTTCTATTGTTCTATTTGAAGCTAACATCCTGGCCGTGTTGTCCGAAGTCCTTTCCGCTATTTTCGCTGAAGTTATGCAAGGAAAACCTGAATTTACTGATCATTTGACACACAAGTTGAAACACCACCCTGGACAAATTGAAGCTGCTGCTATTATGGAACATATTTTGGATGGAAGTGCTTATGTAAAAGCAGATAAGAAGTTGCATGAGATGGATCCTTTGCAGAAACCAAAACAAGATCGATACGCGCTAAGAACTTCACCGCAATGGCTTGGTCCTTTGATTGAAGTGATTAGATTCTCTACTAAGTCAATTGAGAGGGAGATTAATTCTGTTAATGATAACCCTTTGATTGATGTTTCAAGAAACAAGGCTTTGCATGGTGGAAACTTTCAAGGAACACCTATTGGAGTATCCATGGATAATACACGTTTGGCTCTTGCATCAATTGGTAAACTCATGTTTGCTCAATTCTCCGAACTTGTTAACGATTTTTACAATAATGGGCTGCCTTCAAATCTTTCTGCTAGTAGAAACCCTAGCTTGGATTATGGTTTCAAAGGATCTGAAATTGCCATGGCTTCTTATTGTTCCGAGTTACAATATCTTGCGAATCCGGTCACAACTCATGTTCAAAGTGCTGAGCAACACAACCAAGATGTGAACTCTTTGGGTTTGATTTCTTCTAGGAAAACATATGAAGCCATTGAGATTCTTCAACTCATGTCTTCCACATTCTTGATTGCACTTTGTCAAGCAATTGACTTGAGACATTTGGAGGAGAATTTGAAAAACGCAGTTAAGAATATCGTAGGCCAAGTTGCGAAAAGGACCCTTACAACTAGTGTCAATGGAGAGCTTCATCCTTCAAGGTTTTGTGAAAAGGACTTGTTGAGAGTGGTTGATAGGGAGCATGTGTTTGGCTATATTGATGATCCTTGTAGTGCTACGTATCCATTGATGCAAAAACTAAGGCAAGTGCTAGTGGATCATGCATTAGTAAATGGAGAAAGTGAGAGTAATTTGAACACATCAATCTTTCAAAAGATTGCAACTTTTGAGGATGAGTTGAAGGCCATATTGCCAAAAGAGGTTGAAAGTGCAAGATTTGAATATGAGAGTGGAAATCCAACAATTCCAAACAAGATCAATGGATGCAGATCTTATCCACTATACAGGTTTGTGAGAGAAGAGTTGGGAACTAGTTTGTTAACCGGAGAAAAGGTTATTTCACCAGGGGAGGAGTGTGACAAATTGTTCACAGCTATGTGTCAGGGGAAAATCATTGATCCTCTTCTTCAATGCCTGGGAGAATGGAATGGTTCTCCTCTTCCAATTTGTTAA 2181 0.4154 MEAVAAAITENNNQTYDSFCLTNAINNNMKVNSTDPLNWGAAAETMKGSHLDEVKRMVEEYRKPVVRLGGETLTISQVAAIAAHDHGVKVELSESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNRTESNHTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLINNNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAHGPSGEILNAKEAFQMAEINADFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKADKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGSEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTYEAIEILQLMSSTFLIALCQAIDLRHLEENLKNAVKNIVGQVAKRTLTTSVNGELHPSRFCEKDLLRVVDREHVFGYIDDPCSATYPLMQKLRQVLVDHALVNGESESNLNTSIFQKIATFEDELKAILPKEVESARFEYESGNPTIPNKINGCRSYPLYRFVREELGTSLLTGEKVISPGEECDKLFTAMCQGKIIDPLLQCLGEWNGSPLPIC* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1684 726 SUPERFAMILY L-aspartase-like 35 726 IPR008948 GO:0003824
Psa3g1684 726 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 27 726 - -
Psa3g1684 726 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 35 715 IPR005922 GO:0005737|GO:0006559|GO:0016841
Psa3g1684 726 CDD PAL-HAL 71 536 IPR001106 -
Psa3g1684 726 Pfam Aromatic amino acid lyase 73 549 IPR001106 -
Psa3g1684 726 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 208 224 IPR022313 GO:0016841
Psa3g1684 726 Gene3D - 25 272 IPR024083 -
Psa3g1684 726 PANTHER HISTIDINE AMMONIA-LYASE 27 726 IPR001106 -
Psa3g1684 726 Gene3D Fumarase/aspartase (Central domain) 273 720 - -
Psa3g1684 726 Gene3D - 539 660 IPR023144 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1684 Psa-Chr3 149563341 149566100 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1684 19 726 Monolignol Biosynthesis Gene Families AT2G37040 81.780 0.0 1238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1684 K10775 - gmx:100803857 1271.14