Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1666 ATGAGACCATGTACTGTAACAACAACAACAACAAGTAGTTCTTCCAATGGAAATGTTGGTTTTCCTAATTCAAGCAAGTCTTTGAATTTTGCTACTAGACCTGGATTTGGAACAGTTGGGACAAAATGCATTGTGAAGGCTAATCACTTCTTTGCACAGTTACCAGACAAGGACTTAAACCAATATGATGTTACTATTACTCCTGAGGTGTCATTAAGAACAGTAAACAGATCCATTATAGTTGAGCTTGTGAGATTGTATAAAGACTCTGACTTAGGGATGACACTTCCTGCTTATGATGGCAGAAAAAGTATGTACACTGCACGCCAACTTCCCTTTTCATGGAAAGATTTTATGATTAAGCTTGTAGATCAAAGGGACATTTTACAGACCGTTCAACATAATGCTTATGACCAAGATCCTTATGCAAAGGAATTTGGAATTAACATCAGTGAGAAACCAGCGTCTGTTGAAGCACGAATTCTTCCCACCCCTTGGCTTAAATATCACGAAAGTGGGAAAGAAAAGAACTGTTTACCCCATGTTGAAGACCTGCATTTATCACAGTTCATGTCCAAATCTCATAAGCAAACTGCATCAGATATGTTAAGTTCGATTCCATCTCTTCAAGCTGAATCTTCAAATTATAGGATGGAACCGAATCATACAGGTCCTAGCATGAGCAACAAGCTTATTTTGATTGGCTTGAAGGGGTTTTCTAAGCTAAGTCACCTGATTAAGATAGCTCAAGACAACAACACAGCTAGCAAGTTTGTTGAAGCAGACTGTCGGACTACAATGTTCTTCGCCACAGCAGATATAAGAGTTGTTCTCATTAAATTGGCATTTCGACTATTGAGTACGGTAATACTGGATGCATTTCCGGTTTCTAAGCAGCAGAGGTTTGCAAAGGAGACCTTGGAGAATTCTGTTCGGTTTTGGTTCATGAGTGTTGGAGGGTGGATTGAAGATTGTGGATGA 981 0.3925 MRPCTVTTTTTSSSSNGNVGFPNSSKSLNFATRPGFGTVGTKCIVKANHFFAQLPDKDLNQYDVTITPEVSLRTVNRSIIVELVRLYKDSDLGMTLPAYDGRKSMYTARQLPFSWKDFMIKLVDQRDILQTVQHNAYDQDPYAKEFGINISEKPASVEARILPTPWLKYHESGKEKNCLPHVEDLHLSQFMSKSHKQTASDMLSSIPSLQAESSNYRMEPNHTGPSMSNKLILIGLKGFSKLSHLIKIAQDNNTASKFVEADCRTTMFFATADIRVVLIKLAFRLLSTVILDAFPVSKQQRFAKETLENSVRFWFMSVGGWIEDCG* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1666 326 PANTHER PROTEIN ARGONAUTE 10 126 184 - -
Psa3g1666 326 PANTHER PROTEIN ARGONAUTE 10 2 135 - -
Psa3g1666 326 SUPERFAMILY HD-domain/PDEase-like 261 308 - -
Psa3g1666 326 Pfam N-terminal domain of argonaute 42 153 IPR032474 -
Psa3g1666 326 Pfam Argonaute linker 2 domain 126 169 IPR032472 -
Psa3g1666 326 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 2 135 - -
Psa3g1666 326 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 126 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1666 Psa-Chr3 148560310 148561708 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1666 125 182 Eukaryotic Initiation Factors Gene Family AT5G43810 84.483 8.58e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1666 K11593 - gmx:100816999 195.282