Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1665 ATGGATTTCGGAGCCGTGTTCTTCGTCCCCTTTTGTTTTGGTTTCGACACCAAACTCGTGACATCATTCAACAATCCGAAAGCAGCATCTCCATTTTCATTATGTTGCTCTTCAGTTCTGCGCATGAGATATGTTGAGTTTTGGAGTTTTTCGGTGTCGAATCTCACAACCGCTTCGGTGAGGTCAAAGGTGGATTTCGAGCAGAAAGTTCCCTTGGCAATAACCGAAGCATCCATGATGTTGTTCTTGTTGGTGGTTCGTTCCAGATTTGAGGAGCTCAACGTGGATCTCTTTAGGAAATGTATGGAACCAGTTGAGAAATGTTTGAGAGATGCCAAGATGGACAAAAAAGCATCCATGATGTTGTTCTTGTTGGTGGTTCTACTAGAATTCCAAAGAATTCCAAAGGTTCAACAACTTTTGCAGGATTTCTTTAATGGAAAGGAGCTATGCAAAAGCATTAATCCCGATGAGGCTGTTGCATATGGAGTTGTTGTCCAGGCTGTAATTTTGAGTGGTGAGGGGAATGAGAAGGTGCAGGATCTTCTCCTTCTTGATGTTACCCCTCCTGGTACTGCATTGATGATGTTAGATGCTGATAAAATGGTAGATGCTGCCAGTTCTCGTAATCCTACTCTAGTGGGTGCTTTGACCAGGCTTCAGAGGTGTGCACTCAGTAGAAGCTGGGAGATTCAAATTATTGATGCTCAGGCTCTTACGACGGTAGCAAACCAATGA 738 0.4363 MDFGAVFFVPFCFGFDTKLVTSFNNPKAASPFSLCCSSVLRMRYVEFWSFSVSNLTTASVRSKVDFEQKVPLAITEASMMLFLLVVRSRFEELNVDLFRKCMEPVEKCLRDAKMDKKASMMLFLLVVLLEFQRIPKVQQLLQDFFNGKELCKSINPDEAVAYGVVVQAVILSGEGNEKVQDLLLLDVTPPGTALMMLDADKMVDAASSRNPTLVGALTRLQRCALSRSWEIQIIDAQALTTVANQ* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1665 245 PANTHER HEAT SHOCK PROTEIN 70KDA 81 194 IPR013126 GO:0005524|GO:0140662
Psa3g1665 245 SUPERFAMILY Actin-like ATPase domain 83 173 IPR043129 -
Psa3g1665 245 Gene3D - 101 151 - -
Psa3g1665 245 PRINTS 70kDa heat shock protein signature 122 138 - -
Psa3g1665 245 PRINTS 70kDa heat shock protein signature 154 174 - -
Psa3g1665 245 PRINTS 70kDa heat shock protein signature 181 200 - -
Psa3g1665 245 Gene3D - 152 168 - -
Psa3g1665 245 Gene3D Actin; Chain A, domain 4 84 100 - -
Psa3g1665 245 Pfam Hsp70 protein 82 195 IPR013126 GO:0005524|GO:0140662
Psa3g1665 245 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 81 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1665 Psa-Chr3 148559316 148560248 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1665 15 189 Calmodulin-binding Proteins AT3G12580 51.064 8.61e-52 176