Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1664 ATGTCTTGGAAACAATTTGTAGTCTTTTTTCATGAAGAGCTCTTGGCATTTTTCTGCAATGGTTATAGGACAACTCAGAAGCCAGAGCATGATGATACTAGAAATGATGTAGAAGATGTTCCATCCAACAGGTTGCGCTCAAGCCAGAAGTCACCTATCATAATCTCCTCAGAGTTGGAATATGATGCCTTGGATATAAATGACAAGCTTCTCTTGGAGCTTCAAAGCATTGGAATTTCCCCAGAACCTGTGCCCGAGATATCGCAAACTGATGATGAAGGAATATTTGACGATATCACTAGGTTAGAAGAGAATTATCAAAGACAGGTTTACAAGAAGAAATGCTTGCTAGAAGGGTTATTAAAATCTGTCTCAGTGACCAAAGAATGTCAAGAAAAGGATTTTGAAGCACACACTCTAGACAAACTCGTTGTAACGGCTTATGAGAAATACATGGCTTGTCGTGGTCGTAATCCCTTAGGTGGGAGAAATACAAGCAACAAAGTGGCCAAGCAAGCTGCATTGGGATTTGTTAAAAGGACATTGGAGCGGTACCATCAATTTGAAGATACAGGCAAGAACTGCTTCAACGAGCCTTTATTCAAGGATATGTTCTTAGCTGCTTCTTCCCAACGGCTTCCTACGGCGTCTTCCCATGCTCTTCCTACTCAAAGGCTTCCTACGGCGTCTTCCCATGCTACATCACATGTTGCATCTGAGATGATAGATAAGGGTACTTGGTTGGCTGATGCTCAGACTATTCCTCCTCGAGAGTCATCTCATGAAACTAGAAGCAACATTGTTGCGTCATTTGCTCAGGACCTTCCCATGCCGTATGGTTATAAATCTGACATATGGTCGCTTGGTTGCTGCATGTTTGAAATTGTTTTACATCAACCAACATTTCGCGCTCCGAACAATGCTGAAGTTATCAATAAAATAAGTAGATCCGTTATTTCTCCATTGCCAATTGCTTACTCTTCCACACTTAAGCAACTTATCAAGAGCATGTTGAGGAAAAATCCTGAACACAGACCAACAACGGCTGATTTGTTGAGACATGCACTCAACATCTCAAATGTCGGCATACTATGCTGA 1098 0.4162 MSWKQFVVFFHEELLAFFCNGYRTTQKPEHDDTRNDVEDVPSNRLRSSQKSPIIISSELEYDALDINDKLLLELQSIGISPEPVPEISQTDDEGIFDDITRLEENYQRQVYKKKCLLEGLLKSVSVTKECQEKDFEAHTLDKLVVTAYEKYMACRGRNPLGGRNTSNKVAKQAALGFVKRTLERYHQFEDTGKNCFNEPLFKDMFLAASSQRLPTASSHALPTQRLPTASSHATSHVASEMIDKGTWLADAQTIPPRESSHETRSNIVASFAQDLPMPYGYKSDIWSLGCCMFEIVLHQPTFRAPNNAEVINKISRSVISPLPIAYSSTLKQLIKSMLRKNPEHRPTTADLLRHALNISNVGILC* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1664 365 Gene3D Transferase(Phosphotransferase) domain 1 239 361 - -
Psa3g1664 365 PANTHER OS05G0107300 PROTEIN 19 213 - -
Psa3g1664 365 Pfam Protein kinase domain 278 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g1664 365 SMART serkin_6 106 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g1664 365 PANTHER PLANT/F27B13-30 PROTEIN 19 213 - -
Psa3g1664 365 ProSiteProfiles Protein kinase domain profile. 1 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g1664 365 SUPERFAMILY Protein kinase-like (PK-like) 277 355 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1664 Psa-Chr3 148557863 148559115 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1664 279 354 MAP Kinase Kinase Kinase AT4G08500 35.526 3.27e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Psa3g1664 Pkinase 2.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1664 - - gmx:100812435 275.404