Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1658 ATGGAGTCTCCCGATGAGATGGGATGCCAGGCACCAGAACGACCTATTCTTTGCGTTAACAATTGTGGTTTCTTCGGAAGGGAAGCTACCATGAACATGTGTTCCAAGTGCTACAAGGACACATTGTTAACTCAGGAGCAGGACAAACTTGCTGCGACATCAGTTGAAAACATTGTGAATGGCAATGGAAAGCTAGCTGTGACTGCAGGCGCGGTTGATGTACAAGTTGGAAATGTGGAGGTCAATACAGCATGTCCCGAAGTTCCAGATAATTCGGTCTTTGGTGAGAGTGTGGAGATGAAAGCCAAGACTGGTCCTAGCAGATGTGCCACTTGCCGGAAACGTGTTGGATTAACTGGTTTCAGCTGCAAATGCGGCAACCTCTTCTGTGCAATGCATCGCTATTCTGATAAACATGAATGCACTTTTGATTATAGAACTGTTGCTCAGAAAGCCATAGCGGAAGCCAACCCAGTAATTAAGGCAGATAAGCTTGATAAAATCTAG 507 0.4556 MESPDEMGCQAPERPILCVNNCGFFGREATMNMCSKCYKDTLLTQEQDKLAATSVENIVNGNGKLAVTAGAVDVQVGNVEVNTACPEVPDNSVFGESVEMKAKTGPSRCATCRKRVGLTGFSCKCGNLFCAMHRYSDKHECTFDYRTVAQKAIAEANPVIKADKLDKI* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1658 168 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Psa3g1658 168 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Psa3g1658 168 SUPERFAMILY AN1-like Zinc finger 100 163 IPR035896 -
Psa3g1658 168 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 53 - -
Psa3g1658 168 SMART AN1_Zf_4 109 146 IPR000058 GO:0008270
Psa3g1658 168 Gene3D - 6 59 - -
Psa3g1658 168 PANTHER AN1-TYPE ZINC FINGER PROTEIN 4 168 - -
Psa3g1658 168 Gene3D - 89 164 IPR035896 -
Psa3g1658 168 ProSiteProfiles Zinc finger AN1-type profile. 103 149 IPR000058 GO:0008270
Psa3g1658 168 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 2 4 168 - -
Psa3g1658 168 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Psa3g1658 168 Pfam AN1-like Zinc finger 109 145 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1658 Psa-Chr3 147961274 147964022 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1658 5 168 C2H2 Transcription Factor Family AT3G52800 41.071 1.97e-38 127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1658 3 147961274 147964022 Psa3g1658 3 147961274 147964022 ECH
Psa3g1658 3 147961274 147964022 Psa5g6600 5 553453786 553454304 ECH