Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1651 ATGTCTTCACTCTGTACATTCCTCTTCCTCCTTTCTCTAACCTTCCCAATCTTCTCCCTCACTTCATCTTCATCCCAAACCCAAACCCAAACCCTTCTCTCCTTCAAATCCACCATTCAAGACACCAAAAACACATTATCAACATGGTCCAGCACTTCCTCAAACCATTTCTGTAACTGGACTGGAATTTCATGTTCTTCAACTTCATCACCATTCTCAGTAACTTCTGTTAACCTTCAAAACCTAAACCTTTCCGGTGATATCTCATCTTCTATATGTAACCTCCCAAATCTCTCTGATCTTAACCTTGCTAATAATGCATTTAACCAACCTATTCCACTTCATCTTTCTCAATGTAGTTCATTGAAAAGTTTGAATCTTAGTAATAATCTTATCTGGGGTACTATCCCTTCTCAGATTTCTCAGTTTGGTTCATTGTTAGTGCTTGATTTGAGTAGAAACCATATAGAGGGAAATATTCCTGATAGTTTTGGTTCGTTGAAGAATCTTCAAGTGCTTGATATGAATAGTAACTTGCTTTCTGGTGATGTGCCTAAGGTGTTTGGTAATTTGACTAAGCTAGAAGTTCTTGATTTGTCTTTGAATCCTTACTTGGTTAGTGAGATTCCTGAGGATATTGGTCAGCTTGGAAGTTTGAAGCAACTTCTTTTGCAGAGTTCTTCTTTTCAAGGTGAAATTCCTGAGTCTTTGAAGGGTTTGGTTAGTTTAACTCATTTAGATCTCTCTGAGAATAATCTAACTGGTGAGGTTCCAAAGAGTGTTGTGTCTTCTCTTAAGAACATTGTTTCTTTTGATGTTTCACTGAACAAACTTTTGGGTTTGTTTCCGAATGGTTTATGTAAAGGAGGAAAAGGGCTTATAAATTTAAGTCTTCATACAAATGGGTTCACTGGGTTGATACCAAACTCAACTAGTGAATGTAAGAGTCTTGAGAGGTTTCAAGTTCAGAACAATGGTTTCTCTGGTGATTTTCCTGGTGTGTTGTTTTCACTTCCTAAGATTAAGCTCATTAGAGGTGAAAACAATAGGTTTACAGGACAAATACCTGAGTTAATCTCAGAAGCTTCTCAGTTAGAGCAAATTCAGCTTGATAATAACCTTTTTGATGGTGAAATTCCTTCAGGTCTTGGGTTAGTTAAAAGCTTATACAGATTTTCTGCTTCTTTAAATCATTTCTATGGTGAAATTCCTCCTAATTTTTGTGATTCACCAGTTATGAGTATCATGAATCTGTCTCACAATTCTCTTTCTGGTCATATCCCTCAGCTGAAAAAATGCAGGAAGTTAGTTTCACTCTCTTTAGCTGATAACAGTTTAACAGGAGAAATTCCTAATTCTCTAGCTGAACTACCTGTGCTTACTTACCTTGATCTCTCAGATAACAATCTCACTGGTTCAATTCCACAAGGTCTTCAAAACTTGAAGCTTGCACTTTTCAACGTTTCCTATAATCAGTTATCTGGAAAAGTACCATTCTCGTTGATTTCCGGTCTTCCTGCATCATTTTTGGAAGGAAATTCTGGTCTTTGTGGTCCTGGATTGCCAAATTCATGTTCCGATGATGACAAGCCAAGACATCATGTTGCTTCTGGTTTAACAACCTTGGTATGTGCTTTGATCTCTCTAGCATTTGTTGCTGGAATTTCTCTTGTTGCTGGTGGATTTATATTGTATAGGAGATCTAACAAAGGGAATGAAGGTTCAGTATGGCGCTCGGTGTTCTTCTATCCTCTCAGAATTACCGAGCACGATCTTCTTATAGGGATGAATGAGAAAAGCTCGATAGGAAATGGAATTTTCGGTAATGTTTATGTTGTGAGTTTACCTAGTGGTGATTTAGTATCTGTGAAAAAGTTGGTTAAATTTGGAAACCAGTCTTCAAAGAGTTTGAAAGTTGAGGTTAAAACTTTGGCTAAAATTAGGCACAAGAATGTTGTTAAGATTCTTGGATTCTGTCATTCTGATGAAATTGTTGGAGAAGCTGCATTTCAATCAATTTTGGATTCTGAAGCTACATCTTCATGTTACATTGCTCCAGAATACGGATACAATAAGAAAGCAAGTGAACAATTGGATGTGTACAGCTTTGGTGTTGTATTGCTAGAGCTAATTTGTGGAAGACAAGCTGAGAAAGCAGATTCAAGTGATGAGTCTTCAGTTGACATAGTGAAATGGGTTAGAAGGAAAGTGAACATTACTAATGGGGTGAACCAAGTTCTTGACACTAGAATATCACATTCTTGGCACCAAGAAATGGTTGGTGCTTTAGATGTTGCTCTAAGCTGCACTTCTGTGGTACCTGAGAAAAGGCCATCAATGTTGGAAATTGTTAGAGGTCTTCAGTCTCTTGAGTCAAGGACCTGTACTGCAAATTTGCAGGGACCAAGTGATGAACCATCTGTTCCAGTTTGA 2433 0.3761 MSSLCTFLFLLSLTFPIFSLTSSSSQTQTQTLLSFKSTIQDTKNTLSTWSSTSSNHFCNWTGISCSSTSSPFSVTSVNLQNLNLSGDISSSICNLPNLSDLNLANNAFNQPIPLHLSQCSSLKSLNLSNNLIWGTIPSQISQFGSLLVLDLSRNHIEGNIPDSFGSLKNLQVLDMNSNLLSGDVPKVFGNLTKLEVLDLSLNPYLVSEIPEDIGQLGSLKQLLLQSSSFQGEIPESLKGLVSLTHLDLSENNLTGEVPKSVVSSLKNIVSFDVSLNKLLGLFPNGLCKGGKGLINLSLHTNGFTGLIPNSTSECKSLERFQVQNNGFSGDFPGVLFSLPKIKLIRGENNRFTGQIPELISEASQLEQIQLDNNLFDGEIPSGLGLVKSLYRFSASLNHFYGEIPPNFCDSPVMSIMNLSHNSLSGHIPQLKKCRKLVSLSLADNSLTGEIPNSLAELPVLTYLDLSDNNLTGSIPQGLQNLKLALFNVSYNQLSGKVPFSLISGLPASFLEGNSGLCGPGLPNSCSDDDKPRHHVASGLTTLVCALISLAFVAGISLVAGGFILYRRSNKGNEGSVWRSVFFYPLRITEHDLLIGMNEKSSIGNGIFGNVYVVSLPSGDLVSVKKLVKFGNQSSKSLKVEVKTLAKIRHKNVVKILGFCHSDEIVGEAAFQSILDSEATSSCYIAPEYGYNKKASEQLDVYSFGVVLLELICGRQAEKADSSDESSVDIVKWVRRKVNITNGVNQVLDTRISHSWHQEMVGALDVALSCTSVVPEKRPSMLEIVRGLQSLESRTCTANLQGPSDEPSVPV* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1651 810 ProSitePatterns Protein kinases ATP-binding region signature. 602 625 IPR017441 GO:0005524
Psa3g1651 810 SUPERFAMILY L domain-like 205 522 - -
Psa3g1651 810 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 662 798 - -
Psa3g1651 810 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 7 665 - -
Psa3g1651 810 Pfam Leucine rich repeat 146 202 IPR001611 GO:0005515
Psa3g1651 810 Pfam Leucine rich repeat 434 493 IPR001611 GO:0005515
Psa3g1651 810 Gene3D Ribonuclease Inhibitor 289 412 IPR032675 -
Psa3g1651 810 Gene3D Ribonuclease Inhibitor 25 183 IPR032675 -
Psa3g1651 810 PANTHER OSJNBB0022F23.6 PROTEIN 7 665 - -
Psa3g1651 810 PANTHER OSJNBB0022F23.6 PROTEIN 662 798 - -
Psa3g1651 810 Gene3D Transferase(Phosphotransferase) domain 1 668 796 - -
Psa3g1651 810 SUPERFAMILY Protein kinase-like (PK-like) 601 785 IPR011009 -
Psa3g1651 810 Gene3D Phosphorylase Kinase; domain 1 591 665 - -
Psa3g1651 810 SMART LRR_typ_2 191 216 IPR003591 -
Psa3g1651 810 SMART LRR_typ_2 143 166 IPR003591 -
Psa3g1651 810 SMART LRR_typ_2 167 190 IPR003591 -
Psa3g1651 810 SMART LRR_typ_2 240 264 IPR003591 -
Psa3g1651 810 SMART LRR_typ_2 457 480 IPR003591 -
Psa3g1651 810 SMART LRR_typ_2 95 119 IPR003591 -
Psa3g1651 810 Pfam Protein tyrosine and serine/threonine kinase 599 663 IPR001245 GO:0004672|GO:0006468
Psa3g1651 810 Pfam Protein kinase domain 674 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g1651 810 Gene3D Ribonuclease Inhibitor 413 523 IPR032675 -
Psa3g1651 810 SUPERFAMILY L domain-like 25 288 - -
Psa3g1651 810 PRINTS Leucine-rich repeat signature 243 256 - -
Psa3g1651 810 PRINTS Leucine-rich repeat signature 457 470 - -
Psa3g1651 810 ProSiteProfiles Leucine-rich repeat profile. 459 482 IPR001611 GO:0005515
Psa3g1651 810 ProSiteProfiles Protein kinase domain profile. 596 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g1651 810 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Psa3g1651 810 Gene3D Ribonuclease Inhibitor 184 288 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1651 Psa-Chr3 147625107 147627859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1651 662 790 Receptor kinase-like Gene Family AT5G06940 54.962 2.43e-35 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa3g1651 Pkinase 4.7e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1651 - - gmx:100794428 984.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1651 3 147625107 147627859 Psa3g1651 3 147625107 147627859 ECH