Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1631 ATGAGTCTCAAAAGCAATAATTTGTTATCTCTTTTGGTTCCCATTGCTGCAATTTTTGCATCTTTGTATCTCATCAATCCAAATCCACAGTTTTTCACAACTTTGTCTCCATCATCTATTTACTTTGGAAGAGACCACCATCATCATAGGCCACACAGAAAACACCCTGACACCAGAAATGATGAATCTATTTGCGATGATTTTCCACCAGGAATTCCACCTCCAAACACCAATACAACTTCTTATCTTTGTGTTGATCGAAAAGGGTGTTGTAATTTCACAACAGTACAACAAGCTGTTAATGCAGTTCCTGATTTCACCTTAAAAAGAACCATAATATGGATAAACAGTGGCTTCTACTATGAGAAAGTCATGGTTCCAAAAACCAAACCAAACATTACATTTCAAGGACAAAGCTACACTTCAACTGCAATTGCATGGAATGATACAGCAAAATCTGCTAATGGCACATTCTATAGTGGTTCTGTACAAGTTTTTGCCTCCAACTTCATTGCTAAGAACATAAGCTTCATGAATTTAGCACCAATGCCAGCTCCTGGGGCTGAAGGAGCACAAGCAGTAGCCATGAGGATATCAGGAGATCAAGCCGAATTCCGAGGCTGCGGATTCTTTGGAGCTCAAGACACCCTTCATGATGATAAGGGTCGTCATTACTTCAAAGATTGCTATATACAAGGATCCATTGATTTCATCTTTGGCAATGCAAGGTCACTCTATGAGAATTGTCAACTAGTTTCTATAGCAAATCCAGTGCCTCCAGGACAAAAGAACATAAACGGTGCAATTACTGCTCATGGTAGAGTTTCAGGAGATGAAAACACAGGATATGTATTTGTGAACAGTACAATAGGAGGCAATGGTAGAATATGGTTAGGTAGGGCATGGAGGCCATATTCTCGTGTCATTTTTGCATTCACAGTTATGTCTGACATTATTGCCCCTGAAGGTTGGAATGACTTCAATGACCCTACAAGAGACCAGACTATATTTTATGGAGAGTATAACTGCTCTGGGCCAGGGGCTAATGTGAATAGCAGGGCCCCTTATGTACAGAGATTGAATGATACACAAGCTTTTCCATTCCTCAATACAAGTTTTATTGATGGTGATCTATGGTTGGAAACTTAG 1149 0.3977 MSLKSNNLLSLLVPIAAIFASLYLINPNPQFFTTLSPSSIYFGRDHHHHRPHRKHPDTRNDESICDDFPPGIPPPNTNTTSYLCVDRKGCCNFTTVQQAVNAVPDFTLKRTIIWINSGFYYEKVMVPKTKPNITFQGQSYTSTAIAWNDTAKSANGTFYSGSVQVFASNFIAKNISFMNLAPMPAPGAEGAQAVAMRISGDQAEFRGCGFFGAQDTLHDDKGRHYFKDCYIQGSIDFIFGNARSLYENCQLVSIANPVPPGQKNINGAITAHGRVSGDENTGYVFVNSTIGGNGRIWLGRAWRPYSRVIFAFTVMSDIIAPEGWNDFNDPTRDQTIFYGEYNCSGPGANVNSRAPYVQRLNDTQAFPFLNTSFIDGDLWLET* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1631 382 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 32 381 - -
Psa3g1631 382 ProSitePatterns Pectinesterase signature 2. 231 240 IPR033131 -
Psa3g1631 382 PANTHER PECTINESTERASE 8-RELATED 32 381 - -
Psa3g1631 382 Gene3D - 76 382 IPR012334 -
Psa3g1631 382 SUPERFAMILY Pectin lyase-like 82 380 IPR011050 -
Psa3g1631 382 Pfam Pectinesterase 85 377 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1631 Psa-Chr3 146430564 146432763 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1631 54 381 Carbohydrate Esterase AT1G05310 71.037 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1631 - - gmx:100806629 661.759