Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1629 ATGGCAGGAACTGCTTTCTACACCTCCTGCAACTTAGGGAGATGTTGTTTGCTATTAAAAACTCACAATACAAGAACCCTAGCAGGGAAAAAACTACCTCAATGTCAAATGAGAAGGAACTTTACAATAAAAGCAGAAGTGGAATTTGTAACAGCTGATGAAGCTAAGGAACTTGTAGCAGTAAATGGGTTTAATGTTCTTGATGTTAGGGACAAAAATCAGTTTGAGAGAGCTCACATTAAAACATGTTATCATGTCCCTCTTTTTGTTGAAAATACAGACAATGATCCCGGTACAATCTTGTTAAGGACTGTCCACAATAATTTTTCTGGGTTGTTCTTTGGGATACCGTTCACTAGGCCTAATCCTGATTTCGTAAAATCTGTGAAAAGTCAGTTATCGCCTGAAAGTAAACTCTTGATTGTATGTCAGGAAGGATTGAGGTCTGCTGCAGCAGCAAATAAGTTAGAGGAGGCTGGTTTCCAAAATGTAGCATGCATAACATCTGGACTTCAAACTGTGAAACCAGGGACATTTGAATCGGTTGGTTCGACGGAGTTGCAGAATGCTGGCAAAGCTGGTCTGGTGCAAATCCAAGGAAAAATTTCAGCTGTGTTGGGAACTGTTCTTATTTGTGCGTATTTATTCATCACCTTCTTTCCTGATCAAGCAGAGAAGCTGCTCAAACTGGCTCCTGGAAGCTAA 705 0.4028 MAGTAFYTSCNLGRCCLLLKTHNTRTLAGKKLPQCQMRRNFTIKAEVEFVTADEAKELVAVNGFNVLDVRDKNQFERAHIKTCYHVPLFVENTDNDPGTILLRTVHNNFSGLFFGIPFTRPNPDFVKSVKSQLSPESKLLIVCQEGLRSAAAANKLEEAGFQNVACITSGLQTVKPGTFESVGSTELQNAGKAGLVQIQGKISAVLGTVLICAYLFITFFPDQAEKLLKLAPGS* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1629 234 Pfam Rhodanese-like domain 51 172 IPR001763 -
Psa3g1629 234 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 8 232 IPR044615 -
Psa3g1629 234 SMART rhod_4 50 180 IPR001763 -
Psa3g1629 234 CDD RHOD 54 175 - -
Psa3g1629 234 ProSiteProfiles Rhodanese domain profile. 60 183 IPR001763 -
Psa3g1629 234 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 44 172 IPR036873 -
Psa3g1629 234 Gene3D - 35 180 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1629 Psa-Chr3 146293847 146295829 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1629 4 228 Sulfurtransferasese or Rhodanese AT2G42220 66.222 3.79e-110 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1629 - - gmx:100500055 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1629 3 146293847 146295829 Psa3g1629 3 146293847 146295829 ECH