LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa3g1618	ATGTATCAACATTGGTCAAGGATGTATGGAACACAATGGGAATCCTACATGGGAATCAACAACCTAGTTAAGGTTGTTGGATCTGAACAGATGAGTTTTGAGCCAATCAAATCACCTTGCAACAACAACATTGTCAGTTCGAATTTTCAAGGTGAAGAAGAATACTATGATGAGGATGAGATTGAAGTTCCTGATTGGTGTTTTGATAACTTCCCAAAGATAACAGATCCTCCATTGCTGAATTGTCAAGCCTCTGGAGATAACTTCACTGCTTCTCAGTTCACAAACTCCTTGTACTCCGTTGATGAATCTTTGGTGTCCAATACTGAAGATAGTCATAATTCTTCTGAAGAAGAGTATAGTAATTTTCAGTCTGGGAATATGTCGTTCTATAATCACTTTCCTCAGAAACATGATGAATTTCTGAAGAATGATGCTTTCTTAGATGAGAAGAAGCCCCTTGAAATTTCCTTTCAGAGAACTGAGTCAGGGTCATGTACAAAGTCACAAAAGCATAGTCCTCAACTTTATGGAACCACCTGTGTCACTTCTAGCAACTCTGGTTCAAGGAAAACTCTAACAAGTAAAAGAAGAATAAGATGGACAGAAGCACTGCATGAATCATTCATGATGATAGTGGAACACCTTGGTGGTCCAGAAAAAGCAAAGCCTAAGGCAATACTAGATATGATGAAATCAAATTCGCTATCACTTTCTCATGTTAAAAGTCATTTACAGAAATGTAGGTCGACTATACGCTTACATAAAGCTTTGCAGGAAAGATCTAAGGAAGGATTTAGAACAGATAGAGTCACAGAACTTCAACACAAAATCCTTATGCAAATCGAGGAATCGCAGAAGTTGCAACTAGAGGTTCGAAAAAGTATTTCACAGCAGCTAGAGATGCAAAGAAATTTGCAAGCACTAATTGAAGAACATAGCAAGAAGCTCAAAGTAATGCAAAGAGAAAACACCAACCAAAGAATATCATTGACACAACCAGAAGGTCAATAG	1014	0.3767	MYQHWSRMYGTQWESYMGINNLVKVVGSEQMSFEPIKSPCNNNIVSSNFQGEEEYYDEDEIEVPDWCFDNFPKITDPPLLNCQASGDNFTASQFTNSLYSVDESLVSNTEDSHNSSEEEYSNFQSGNMSFYNHFPQKHDEFLKNDAFLDEKKPLEISFQRTESGSCTKSQKHSPQLYGTTCVTSSNSGSRKTLTSKRRIRWTEALHESFMMIVEHLGGPEKAKPKAILDMMKSNSLSLSHVKSHLQKCRSTIRLHKALQERSKEGFRTDRVTELQHKILMQIEESQKLQLEVRKSISQQLEMQRNLQALIEEHSKKLKVMQRENTNQRISLTQPEGQ*	338

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa3g1618	337	SUPERFAMILY	Homeodomain-like	194	252	IPR009057	-
	Psa3g1618	337	TIGRFAM	myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class	196	250	IPR006447	GO:0003677
	Psa3g1618	337	PANTHER	MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN	17	330	-	-
	Psa3g1618	337	Gene3D	-	195	252	-	-
	Psa3g1618	337	Coils	Coil	303	323	-	-
	Psa3g1618	337	PANTHER	MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE	17	330	IPR044848	GO:0003700

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa3g1618	179	320	G2-like Transcription Factor Family	AT4G28610	42.568	2.35e-26	106

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GARP-G2-like	Psa3g1618		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa3g1618	-		-	mtr:MTR_7g093010	486.108