Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1607 ATGTCTCGACCACACATTGATCACATCATCAGCGTGAAACGCGAATTGAATATTAGTATGAGAGATGGTAATAACAGCAATGACGATGAAAACAGCCACGGCGACGACGTTGATTATCAAACTCCTAACGGCCGTCGAGATCTCCGTTCTCGCTACCTCGCCGTCAAGAACATGATTCACGGTGATGAACAAGAAAATATTGCAAAGACTGACTCTGAAGTATTTGGTTCGATCTTCAATGAAATTGAGAACTTACACCAATCAGTCACAAAAACAAGAGAACAAGTAGCTGATGCACAGGCACTTTTGGACATAACCAAATCCTTGGTAGTGTCTGCAAAAGGTCATTCTAGTAATGGACTCACTCCTTCAGCCTTTGTTACCCACATTATTGAAAAATTTGGAAAACGAGGTGGAACAAGTACTGGCAGAGAAGATTGCAACTCAATAGCTTGGAAGGAGATTGGAGTTGCAGTTTCAAGTGTTTTTGGAGGGGGATATGGGTGTTCTACAATGATTGGCCCAATGGATACTAAAATAAAACAGAAGAGGGTTTGTAGAAAAAAGCGTTTGAAGCCAACTGAATTGGCACGGCCGGAACAGGAACTCTTTTGCACAAACGGTAGAGAACTTAAAGAGAGAAATGATACGGATAAAACCATGTTAACTATGTTTAACATCTTAAGGAAGAATAGATCTGTCAAGCTTGAAAATTTGGTTTTGAATAGGAACTCTTTTGCACAAACGGTAGAGAACTTATTTGCTTTATCTTTTTTAGTCAAAGACGGGCGGGCTGAAATTAAAGTAGACAAGGCTGGACGTCATCTAGTTTCACCAAGGAATGCTCCTGCCGCAAAATTAGTTATTTCTAAGGATGTTGCTTTGAGCCACTTTGTGTTCAGACTTGACTATATTGATTGGAAGTTGATGGTTCGTTCTGTTGTTGGGGAGGAGTTGATGCCTCATAGGATTATTCAACCACAAACTTAG 990 0.404 MSRPHIDHIISVKRELNISMRDGNNSNDDENSHGDDVDYQTPNGRRDLRSRYLAVKNMIHGDEQENIAKTDSEVFGSIFNEIENLHQSVTKTREQVADAQALLDITKSLVVSAKGHSSNGLTPSAFVTHIIEKFGKRGGTSTGREDCNSIAWKEIGVAVSSVFGGGYGCSTMIGPMDTKIKQKRVCRKKRLKPTELARPEQELFCTNGRELKERNDTDKTMLTMFNILRKNRSVKLENLVLNRNSFAQTVENLFALSFLVKDGRAEIKVDKAGRHLVSPRNAPAAKLVISKDVALSHFVFRLDYIDWKLMVRSVVGEELMPHRIIQPQT* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1607 329 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 10 326 - -
Psa3g1607 329 Coils Coil 82 102 - -
Psa3g1607 329 MobiDBLite consensus disorder prediction 18 45 - -
Psa3g1607 329 MobiDBLite consensus disorder prediction 26 45 - -
Psa3g1607 329 Pfam Nse4 C-terminal 234 314 IPR014854 -
Psa3g1607 329 PANTHER UNCHARACTERIZED 10 326 IPR027786 GO:0005634|GO:0006281|GO:0030915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1607 Psa-Chr3 145063803 145067162 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1607 45 323 Non-SMC Element family AT1G51130 53.901 3.36e-96 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1607 K22825 - gmx:100781485 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1607 3 145063803 145067162 Psa3g1607 3 145063803 145067162 ECH