Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1604 ATGTGGCAGTTTCTAAAATATCAATTTCTCGGGATCCGGATCCCTTACAAAACTTATAGTTTTAGCACTGAAACGTTTGATGCTGACCCTTTAACGAAGTCGGTGAGACTTGAAAGGCATTTCCGTGGCGAATTCTCCATGGCTTCTGTTCAGTCAAATAAGGATATGGAAGACCACAACCAAGTTGATGTTAGCCATGGTGCACTCTTTGTTGGAATTTATGATGGCTTTAAAGGCAACAACGCTGCCTCCTATATCCGTAGACACATCTTTAGGGCCCTACTGAGGCGTATTGAGCTGAATGATAACCAAATGACTGTGGCTATTTTGAGGGAAGTTGTTGAGGAAATCGAAAACGGGTTTCTTGAGTATGCTACAAATACTTACGAGCAAAATCAACATCAGGTAGGGATAGGTTTAGTTAGTTCAGGTTGTTTGATTTGTATTATATGGAGAGGGATACTATATCTTGCCAATGTTGGAAACTCGCGCGCTGTACTTGGTTCTAAGGAGCGTGTTGGTCCATTTAAAAGATTCCGTGTAGAGCAATTGGTTAGAGATCACAGTTGTGATAATCCAGATATTCAAAATGAACTCCATGCAATGCATCCAGATGATAAAAATATTTGCGAATTTAGTGAAGTGCGGCCTATAACTGATTATCAAGTGTACCCTTTACATGAATATTATTCTAGCAAAGATCCATCGTGGACTATTAAAGGCTTAATCAAAACAAGCAGATGTATAGGATATGCATACTTGAAGAAGGCACTGTTTACTGTGGGCACATCATTCCGTATCCCGACGCATGAACGAGTGGTTTCACTTTTTACAAGACCTGTGCTAACATCAGAACCAGAAGTTTATTCAAGAGTCTTAAAAAACACGGATAGATTCATTATATTTGGATCTAGCGGATTTTGGAAACTGATGTCAAATGAGTTTGCTGCTAGAATTGTTAACAGCAGTCCACGAGATGATATCGCGAAAAGACTAGCCATATTTGCTATAGAGAAGGGGGCTGGTAAAAAGGGAAACAAATACAGTGACATTGTCAGGTTTCCTAAGGGAGAAGAAGTTAGCGGGGATTGGGATTTGAAACGGCGCAGAACTAGACCGATTTATTATGATGATATGACTGTGATTGTTGTATTTTTCGACAAAAGGCCAAGTGGTGTGAGGCCGGAGATCAATTGTTATACTTGCAGTGATTTCGCAGATCAACTATCAGAAACTTATCATCTTACCGCTGAAACGTTTAATAATGACCCTTTTGCGAGATCAATGAGACTGGATAGGCATTACCGTGGTGAATTCTCTATGGCTGCAGTTCAGTCAAATAAGGATATGGAAGATTACAGCCATGTTGATGTTGGCCATGATGCACTCTTTGTTGGAATTTATGATGGCTTTAAAGGCGACACCGCAGCCATCTATATCCGTAGACACATCTTTAAGGCTCTATTGAGGCGTATTAGGGAGAATAACAACAATATGACTGTTCCTATTTTGAGGGAAGTTGTTGAGGAAATCGAAAGCGGGTTTATTGAGTTTGCTAGAAATAGTTTTTTGCAACAACATCAGGCACATATAGGTTTAGTTAGTTCAGGTTGTTTGATTTGTATTATATGGAGAGGGACACTATATCTTGCTAATGTTGGAGACTCGCGCGCTGTACTTGGTTCTCGGAAGGGTGTCGGCCCTTTTAAAAGATTGTGTGTGAAGCAAATGGTCAGAGTTCACAGTTGTGAAAATTCGGATGTTAAAAAAGAACTTCGTAAATGGCATCCAGATGATAATCTTATTTACGAACTAAATGAATTACGCGATGAGGTGCATTCTCATATTAGCAAAGGTCAATTATGGACTATTAAAGGCTTAATCCAGACAAGCAGGTGTATAGGATATGCATACATGAAGAAGGTTCCGTTTACTCAAAGGAGAACGTTCAAAATCCCAATCGGAGAACGAGTTGTTTCGGCTTTTACAAGACCTTTGCTATCATCAGAACCAGAAGTTTATTCAAGAGTCTTAAAAGACACTGATAGTTTTGTTATATTTGGATCTAGCGGATTTTGGAAATTGATGTCAAATGAGCTTGCTGCTAGAATTGTTAACACCAATCCACGAGATAATATCGCGAAAATACTTGCCATGGTTGCTATAGAGAAGGGGGCTAATAAAAAACGGAAAAAATACTGCGACGTTATAGAGATTCCGAAGGGAAATGGTGTTAGTGGGGATTTTGGTTATGTGCATGACAGAATTAGACCGTTTTATCATGATGATATAACTGTGATTGTTGTATTTCTCGACAAAAGACCGAATGGTGTGAGGCCAGAGATAAAGTCTTATACTTGCAATGATTACACAGATATACCATCAGAGTTTACGCATTTCTATAATAATACGAATGAGTGA 2421 0.3916 MWQFLKYQFLGIRIPYKTYSFSTETFDADPLTKSVRLERHFRGEFSMASVQSNKDMEDHNQVDVSHGALFVGIYDGFKGNNAASYIRRHIFRALLRRIELNDNQMTVAILREVVEEIENGFLEYATNTYEQNQHQVGIGLVSSGCLICIIWRGILYLANVGNSRAVLGSKERVGPFKRFRVEQLVRDHSCDNPDIQNELHAMHPDDKNICEFSEVRPITDYQVYPLHEYYSSKDPSWTIKGLIKTSRCIGYAYLKKALFTVGTSFRIPTHERVVSLFTRPVLTSEPEVYSRVLKNTDRFIIFGSSGFWKLMSNEFAARIVNSSPRDDIAKRLAIFAIEKGAGKKGNKYSDIVRFPKGEEVSGDWDLKRRRTRPIYYDDMTVIVVFFDKRPSGVRPEINCYTCSDFADQLSETYHLTAETFNNDPFARSMRLDRHYRGEFSMAAVQSNKDMEDYSHVDVGHDALFVGIYDGFKGDTAAIYIRRHIFKALLRRIRENNNNMTVPILREVVEEIESGFIEFARNSFLQQHQAHIGLVSSGCLICIIWRGTLYLANVGDSRAVLGSRKGVGPFKRLCVKQMVRVHSCENSDVKKELRKWHPDDNLIYELNELRDEVHSHISKGQLWTIKGLIQTSRCIGYAYMKKVPFTQRRTFKIPIGERVVSAFTRPLLSSEPEVYSRVLKDTDSFVIFGSSGFWKLMSNELAARIVNTNPRDNIAKILAMVAIEKGANKKRKKYCDVIEIPKGNGVSGDFGYVHDRIRPFYHDDITVIVVFLDKRPNGVRPEIKSYTCNDYTDIPSEFTHFYNNTNE* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1604 806 ProSiteProfiles PPM-type phosphatase domain profile. 435 771 IPR001932 -
Psa3g1604 806 PANTHER ALPHABET, ISOFORM E-RELATED 22 388 - -
Psa3g1604 806 PANTHER ALPHABET, ISOFORM E-RELATED 413 774 - -
Psa3g1604 806 SMART PP2C_4 432 769 IPR001932 -
Psa3g1604 806 SMART PP2C_4 38 384 IPR001932 -
Psa3g1604 806 CDD PP2Cc 439 771 IPR001932 -
Psa3g1604 806 ProSiteProfiles PPM-type phosphatase domain profile. 44 386 IPR001932 -
Psa3g1604 806 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 22 388 - -
Psa3g1604 806 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 413 774 - -
Psa3g1604 806 SUPERFAMILY PP2C-like 439 773 IPR036457 -
Psa3g1604 806 CDD PP2Cc 45 386 IPR001932 -
Psa3g1604 806 SUPERFAMILY PP2C-like 43 388 IPR036457 -
Psa3g1604 806 Pfam Protein phosphatase 2C 463 727 IPR001932 -
Psa3g1604 806 Pfam Protein phosphatase 2C 69 343 IPR001932 -
Psa3g1604 806 Gene3D - 413 776 IPR036457 -
Psa3g1604 806 Gene3D - 28 391 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1604 Psa-Chr3 144951710 144955211 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1604 428 802 PP2C-type Phosphatase Gene Family AT5G06750 38.320 8.90e-71 236