Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1603 ATGGGGCTGTTTCTAAAATATCTACTTTTCGGGGTCCCGGTCCCTTACAAAATTTATCGTGTCAGAACTAAAACTTTTAATGCTGACCCTTTAGCGAGGTCGATGAGACTGGAAAGACATTACCGTGGCGAATTCTCCATGGCTGCAGTTCAGGCAAATAAGGATATGGAAGATCACAGCCATGTTGAAGTTAGCCATGATGCAATCTTCGTTGGGATTTATGACGGCTTTAAAGGAAACACAGCTGCCACGTATATCCGTAGCCACGTCTTTCAGGCTCTATTGAGGCGTATTATGGAGAATAATAACAATATGACTGTGGCTATATTGAGGGAAGTTATTGAGGAAATCGAAAGCGGATTTATGGAATATGCTAGAAGTAGTTTTGAGCATCAACATCAGGAACAGATAGGTTTAGTTAGTTCAGGTTGTTTGATTTGTTTTATATGGCGAGGGACACTATATCTTGCCAATGTGGGAGACTCGCGCGCTGTGCTTGGTTCTGAGAAGGATATTGGTCCATTTAAAAGATTGCGTGTGAAGCAAATGGTTAGAGATCACAATTGTGATAATTCAGATGTTCAAAAAGAACTCCGTGCATTGCATCCAGATGATAATCTTATTTACGAATTTAGTGAAATGTACCACCCAAATGTTGATTATCATGCTAACAAAGATCCATCATGGACTATTAAAGGCTTAATCGAGACAAGCAGATGTATAGGATATGCATACATGAAGAAGGTTCCGTTCACTCAAAGGAGATCATTCCAAATCCCAATGCGAGAACGAGTGGTTTCAGCTTTTACAAGACCTGTGCTAAGATCAGAACCAGAAGTTTATTCAAGTGTCTTAAAAGACAATGATAGTTTCATTATATTTGGATCCAGCGGATTTTGGAAATTGATGTCAAATGACTTTGCTGCTAGAATTGTTAACACCAGTCCACGAGATAATATCGCGAAAAGACTAGCCATAATTGCTATAGAGAAGGGGGCTGATAAAAAGGAAAGCAAATACAGTGACATTGCAGAGCTTCCTAAGGGAGATTGTGCTAGTGGGAATTGGGATATGGTACCTGACAGATCTAGACCGATTTATCATGATGATATAACTGTGATTGTTGTATTTTTCGACAAAAAGCCGAATGGTGTGAGGCCAGAGATCAAGTCTTACACTTGCAATGATTATGCAGATCTACCATCAGAGTTTATATTTTTCTACAATAATATGAATGTGTGA 1242 0.3921 MGLFLKYLLFGVPVPYKIYRVRTKTFNADPLARSMRLERHYRGEFSMAAVQANKDMEDHSHVEVSHDAIFVGIYDGFKGNTAATYIRSHVFQALLRRIMENNNNMTVAILREVIEEIESGFMEYARSSFEHQHQEQIGLVSSGCLICFIWRGTLYLANVGDSRAVLGSEKDIGPFKRLRVKQMVRDHNCDNSDVQKELRALHPDDNLIYEFSEMYHPNVDYHANKDPSWTIKGLIETSRCIGYAYMKKVPFTQRRSFQIPMRERVVSAFTRPVLRSEPEVYSSVLKDNDSFIIFGSSGFWKLMSNDFAARIVNTSPRDNIAKRLAIIAIEKGADKKESKYSDIAELPKGDCASGNWDMVPDRSRPIYHDDITVIVVFFDKKPNGVRPEIKSYTCNDYADLPSEFIFFYNNMNV* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1603 413 Gene3D - 22 383 IPR036457 -
Psa3g1603 413 SUPERFAMILY PP2C-like 45 380 IPR036457 -
Psa3g1603 413 CDD PP2Cc 45 378 IPR001932 -
Psa3g1603 413 ProSiteProfiles PPM-type phosphatase domain profile. 44 378 IPR001932 -
Psa3g1603 413 PANTHER ALPHABET, ISOFORM E-RELATED 23 381 - -
Psa3g1603 413 Pfam Protein phosphatase 2C 63 333 IPR001932 -
Psa3g1603 413 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 23 381 - -
Psa3g1603 413 SMART PP2C_4 38 376 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1603 Psa-Chr3 144948841 144950867 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1603 31 409 PP2C-type Phosphatase Gene Family AT5G06750 38.542 1.24e-75 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1603 K01102 - gmx:100778238 255.373