Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1602 ATGTTTCTGTGCGTTCAAAATGTACTATGTGCTTGCTCAAGCAAAAACACTCTTGACATGGTTGATGATATTGACATTGATGAATTTCGCGCTGATCCTTTAGGGTGGACAATGAAAGTAATTAAGCATCCATTCGGTGAATTCTCCATGGCTGCAGTACAGGCAAATGAAGACATGGAAGATTTCAGCCAGGTTGAGATTGACAAGGAAGCACTTTTCGTTGGAATTTATGATGGCGAAAATGGCGTCATTGCTTCCGAATTTCTGAGTCAAAGCCTCTTGCCGGCTCTATTATTTCTTATTAAGCAGAATGGTGAAAATATGTCTGAAGATATTTTGAGGGATGTTGTTGATAGAATGGAAAAAAGGTTTATGCTTGATGCTGACGAGTTACATTACCATCAGCCGGAGCGAGTTCAAGCTAGTTCTAGCTGTTTGTGTTGTATTATATGGAAAGGGAGACTATATATTGCTAACCTTGGAGACTCCCGGGCTGTGATGGGTTCTTTGGGTCCATTTGATATACTCCGCGTTCAGCAGTTGGTCAGAGATCACAATGCTGGTAACAGGCATATTAAAGTAGAACTCGCGAGATTGCATCCAGATGATCCGAATATTGTGATGTATCATCGTGATGCATGGCGTGTTAGAGGCATAAGCAAGGTGAGCAGATGTATAGGAAATGCATATTTGAAGCGGGAGCGTTTCACTTTAGACCCATCATTCGAAGTACCGCGGACAGAACTTGCGCCTTCTGATTTTACCCGAACTTTGCTATCAGCAGAACCCGAGATACATTCAAGAGTCTTAAGAGACAGCAATAAATTCATCATATTTGGATCTGGTGGACTTTGGAAATTACTTACAAATGAGGAAGCGGCTAAAATTGTTAACACCAATCCACGAGAAGGAATTGCAAAAAGACTTGTGAGGATTGCTCTAGAGGTTGCAGCTAGAGAGAAGAATATAACCTATAATGAGCTTTTGAAACTTCCTAAGGGACATGATTTTACTAAGGGTCCAAGTGTTTCTTTTGAAAGAACAAGGCGGAGTTATCATGATGATATCTCTGTGACTGTTGTATTTCTCGACAAAACGCCAGATATAGATATGTCTGTGATGCGGGATGTGATCCCCTCAGTGCCAACGATCAATTCCTTCAGAAGCTTCCATGACACGGCTCTTCGTTCGTGTTTTCACCGGATGTATGCTCCTGAACCAGTGATTATTCGTTCGACTGTGGATTTTTAA 1251 0.4149 MFLCVQNVLCACSSKNTLDMVDDIDIDEFRADPLGWTMKVIKHPFGEFSMAAVQANEDMEDFSQVEIDKEALFVGIYDGENGVIASEFLSQSLLPALLFLIKQNGENMSEDILRDVVDRMEKRFMLDADELHYHQPERVQASSSCLCCIIWKGRLYIANLGDSRAVMGSLGPFDILRVQQLVRDHNAGNRHIKVELARLHPDDPNIVMYHRDAWRVRGISKVSRCIGNAYLKRERFTLDPSFEVPRTELAPSDFTRTLLSAEPEIHSRVLRDSNKFIIFGSGGLWKLLTNEEAAKIVNTNPREGIAKRLVRIALEVAAREKNITYNELLKLPKGHDFTKGPSVSFERTRRSYHDDISVTVVFLDKTPDIDMSVMRDVIPSVPTINSFRSFHDTALRSCFHRMYAPEPVIIRSTVDF* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1602 416 CDD PP2Cc 45 363 IPR001932 -
Psa3g1602 416 Pfam Protein phosphatase 2C 66 319 IPR001932 -
Psa3g1602 416 PANTHER ALPHABET, ISOFORM E-RELATED 19 366 - -
Psa3g1602 416 SUPERFAMILY PP2C-like 39 365 IPR036457 -
Psa3g1602 416 ProSiteProfiles PPM-type phosphatase domain profile. 44 363 IPR001932 -
Psa3g1602 416 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 19 366 - -
Psa3g1602 416 Gene3D - 36 368 IPR036457 -
Psa3g1602 416 SMART PP2C_4 40 361 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1602 Psa-Chr3 144946564 144948341 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1602 34 364 PP2C-type Phosphatase Gene Family AT5G06750 44.179 6.83e-90 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1602 K01102 - pvy:116121639 292.737