Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1599 ATGCTTATATGTTTAGCCCCGCATCATCACTCTTCAGAGTTCACGACCAAAAAAAGAGTGCGAGTTTCGAACTTTTCCCGCCAAGCCATGACAATGGAGAGAGTGCAATGCTCCTATGAATCTCTGGATGAAACGTTCGAAATTGGGAAAGAGATGTATCGTGGACAGCAATACAGTCAAATTTACTTCGCTCGTCTTCGCTTGATGAGAACTCTCTTGTATTCCCTTGTTTCCCAATGGAAACCTAATTCTCCTGTGTGCACGGTGTTGGGACTGGAAGAGGGCAAGGAGTGTGTTGTTGTTGGGACACTGTTTAAAAACATGAAATTGAAACCTTGCATACTTGATGAGTATTCTAAAGAGAGATCGGTTGTCCCGCTTGTCAAGCTGCATAACTTTGTGGACAAAGATGATTATCTTGTTTTGGAAGATGAAAGTGGAAGAGTTAAGCTTGGTGGGAATATTATTGTACCATCTGTCTATGTAACAGGAATTGTGGTTGCTATACATGGTAAGGAGACTGGAGCAGGTGATTTTTTGGTTCAGGAAGTTCTAGAAGCTGGCTTACCACCGCAGATAGAATTCCCTATTAAATCAAGGGAAGACAGATATGTTCTTCTTGTGTCAGGATTATGTATTGGCAGCAGCAAGTCTAACCCTCTTCAATTTCAGCTTCTAGTTGACCATATTACTGGGCACTTAGGAGATGAGAAGGAGCAAAGTATTGCGTCGCAAATTGTTCATGTAGTAATTGCTGGAAATTCTGTTGAGATACCTCGGGGACTTCTTAATGGACAGAATTTGGCTTCAAAAGATCTCTCGAAGATGGCAGAACCAGTAAAGGAGCTAGATATTCTGTTGAATCAGATTGCTGCGGGTTTACCATTGGATATCATGCCAGGACCCTGTGACCCTGCTAATTTCTCATTACCACAACAGGCATTGCATAGATGCCTTTTCCCCGGGTCATCAGTTTACAACACTTTTAGATCTTGTACAAACCCTCATTGTTTTGAGCTTGATGGTATCAGGTTTCTTGGGACATCTGGTCAAAATGTAGATGATCTTGAGAAGTATTCCGAAGCAAAAGATAAGCTTGACTTTATGGAAAGGACATTACAATGGAGGCATTTGGCACCAACTGCACCTAATACCCTTGGTTGCTATCCTTATACTGATAGGGATCCTTTCTTCATTCAGAATTGTCCTCATGTGTACTTTGTCGGCAATCAGGATAAATATGATACTCGTGTGATAAAGGGATCAGAAGGCCAATTGGTTAGACTCATATGTGTTCCTAAATTCAGTGAAAATGGAGTTGCAGTTATGTTGAATCTGAGGGATCTTGAATGTCATACTCTCAGTTTTGGAACTCAGTTCAGCCCATAA 1389 0.414 MLICLAPHHHSSEFTTKKRVRVSNFSRQAMTMERVQCSYESLDETFEIGKEMYRGQQYSQIYFARLRLMRTLLYSLVSQWKPNSPVCTVLGLEEGKECVVVGTLFKNMKLKPCILDEYSKERSVVPLVKLHNFVDKDDYLVLEDESGRVKLGGNIIVPSVYVTGIVVAIHGKETGAGDFLVQEVLEAGLPPQIEFPIKSREDRYVLLVSGLCIGSSKSNPLQFQLLVDHITGHLGDEKEQSIASQIVHVVIAGNSVEIPRGLLNGQNLASKDLSKMAEPVKELDILLNQIAAGLPLDIMPGPCDPANFSLPQQALHRCLFPGSSVYNTFRSCTNPHCFELDGIRFLGTSGQNVDDLEKYSEAKDKLDFMERTLQWRHLAPTAPNTLGCYPYTDRDPFFIQNCPHVYFVGNQDKYDTRVIKGSEGQLVRLICVPKFSENGVAVMLNLRDLECHTLSFGTQFSP* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1599 462 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 28 456 IPR024826 -
Psa3g1599 462 CDD MPP_PolD2_C 204 456 IPR041863 -
Psa3g1599 462 Pfam DNA polymerase alpha/epsilon subunit B 205 414 IPR007185 GO:0003677|GO:0006260
Psa3g1599 462 Gene3D - 63 187 - -
Psa3g1599 462 Gene3D - 196 461 - -
Psa3g1599 462 Pfam DNA polymerase delta subunit OB-fold domain 57 184 IPR040663 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1599 Psa-Chr3 144916869 144922895 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1599 33 461 Core DNA Replication Machinery Family AT2G42120 76.923 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1599 K02328 - gmx:100780072 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1599 3 144916869 144922895 Psa3g1599 3 144916869 144922895 ECH