Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1591 ATGGGATCAGATGATATCTCCCATTTTCATCAAATTCTTGAGGCTAGGATGAGAGAAGCCAATAGAAACAACAATGTAGGAAAATTTGTTCGTCGTGTTGAAATGACGCAGAGAAGGAGCATTATGTACTATCGACAATTAAAATCTCATCCCTTTCTAAAAATTGTTGTTGCACTCCCAACGATGGTTGCTAGCTGCCGTGGTATTCTTGATAGAGGTATTCAACTTGATGGTTTTGGCATGAAAAGCTTCATGACGTATGAAAGCAATGTACTTTTTGCTCTTCGTTTCATGATTGATTGCAGCATAGCTGGCGGAAATTGGATTGAAATTCCTATTGGAAAATATAAGAAGGCAACAAAAAGCTTGTCGTATTGCCAGTTAGAGTTTGATTGCTTGTATTCCAACTTGATTAGTCATGCTCCAGAAGGGGAATATTCAAAGATGGCACTGTTTCAGATTTTGAGTTTCGACATTAAATGTGTTGGTCGCAAAGGACATTTCCCCGAACCTACCCAAGATCCTGTGATCCAGATTGCTAATCTGGTAACTTTACAAGGATAA 564 0.3865 MGSDDISHFHQILEARMREANRNNNVGKFVRRVEMTQRRSIMYYRQLKSHPFLKIVVALPTMVASCRGILDRGIQLDGFGMKSFMTYESNVLFALRFMIDCSIAGGNWIEIPIGKYKKATKSLSYCQLEFDCLYSNLISHAPEGEYSKMALFQILSFDIKCVGRKGHFPEPTQDPVIQIANLVTLQG* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1591 187 Gene3D DNA Polymerase, chain B, domain 1 3 123 - -
Psa3g1591 187 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 4 187 - -
Psa3g1591 187 Gene3D - 152 187 IPR036397 GO:0003676
Psa3g1591 187 SUPERFAMILY Ribonuclease H-like 27 181 IPR012337 -
Psa3g1591 187 Pfam DNA polymerase family B, exonuclease domain 22 184 IPR006133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1591 Psa-Chr3 144190711 144191877 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1591 1 187 Core DNA Replication Machinery Family AT5G63960 76.471 2.62e-102 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1591 K02327 - gmx:100817379 335.88