Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1555 ATGTCACTTCTCTTCAATTTCTTTCCCCTCCTTTTCCTTCTCCTCCTTTTCCCCTCCTTTTCCTTCTCCGCCACACCATGTCCCTTAAACATAACCCTCCTCCGCCACATCGGCGACGGCTCACGACCTTCCACAACCTCCGGCTCCCAGTGCCACTACATCCTCCAAGCTCTCCACCTCGTCCAAGCCGATTACCTCCACCGCACCGGCTTCTTCGTTCCACCTCCCAACACCTCCGAATCATGCTGGTCTTCTTTCCAATCCTTCATCGACGAATTTCAACCTAATTTCGATATTCGTCCCTCTTGCGGCTTTCAAACCTCGTGGATCTCTCAAGGTTGCATGAACATCACAACCAAACAACAATTCGAACAACAAGTTTCGCCACCCGCGCTTCTATCTCTTCAATCGAACTGTAACGTATCTCTTGATAACAACGCTCCTTGCGCTCTCTGCACAGCGAAACGCTCGGAAGTTCTTACTTCATTGACCGGAGTAACCGTCAGTAATGTCTCTGATTGTAGATCTTATACCGCGATTTACGCCGCTTCACTTTCCGATCAGTTTGGTCCTACTAACATCGGAACTGCTAAGTGTTTGTTCGGTCTCGATTTTTCGTCGTCTTCGGGTTCTGGTAGTAAGCATCACACCATTGTCATTGTGCTTGTTACTGTTTTTGTGTTTTTAGGATTGTTATTGTTTGGTGGTTTTTGGGGTTATTTTAGATATAAGAAGAAAAAGAGTGGGAATTCGAAGGGTAATAGTAGTAGAACCGAGATTATTTTAGGGTTGAGTTCTGGTTTGGATAATATGAACCAGAGTACTACTTTGATTAGGTTTAGTTTTGATGAGATTAAGAAAGCAACTAGGAATTTTTCTAGGGATAATATAATTGGAAGTGGTGGTTATGGAAATGTTTATAAAGGTTTATTATCGGATGGAAGTGAAGTTGCAATGAAAAGGTTTAAGAATTGTTCGGTTGCTGGTGATGCGAGTTTTAGTCATGAGGTTGAAGTTATTGCGAGTGTTCGACATGTTAATCTTGTTGCTTTGAGAGGCTATTGTACGGCGACGACTAATTTAGAAGGTCATCAAAGGATTATTGTTACTGATTTGATGGAGAATGGGAGTCTTTATGATCATTTGTTTGGTTCTTCGAAGAAGAAATTGAGTTGGCCGATTCGTCAGAAGATCGCGCTTGGCACGGCTAGGGGTTTGGCTTATTTGCATTATGGTGCTCAGCCTTCGATTATTCATAGGGATATTAAAGCGAGTAATATACTTTTGGATGAGAAGTTTGAAGCTAAGGTAGCGGATTTTGGATTGGCGAAGTTCAATCCTGAGGGAATGACTCATATGAGTACTAGGGTAGCTGGAACTATGGGATATGTTGCTCCTGAGTATGCTTTGTATGGACAGTTGACAGAGAGGAGTGACGTGTTTAGTTTTGGTGTTTTGCTTCTCGAGCTTTTGAGTGGAAGAAAGGCGCTTGAAACGAATGAGGATGGTCAACCATCTGCTTTCAGCGACTTGGCCTGGTCATTAGTTAGAAACAATAGGGCTTTGGATGTTGTTGAGGATGGTATGCCAGAATCTGGAACACCGGAAATTCTTGAGAAGTATGTTCTGGTTGCCGTTTTATGTTCTCATCCACAGTTATATGCAAGGCCAACGATGGATCAGGTTGTGAAAATGTTGGAAACAGATGATGAACCGTTGCCCTCGGTTGTTGAAAGGCCAATTCCTTTTATTGCAGGGAGACTTGATATCGAAAAATCTACTAACAGTAACTCGGGTCAGCTCTGCAGTCCAACTGGTTATCAAGCATATACATTGCAATTACAAAATCGCCGCGCGTCTACTTGTAACGAAGAAGACGAAGAAAACTCCGAGGGTGTTTCTAATAGTATGGAAGCGGAAGGAAACTCTGAACGTGTTTCAAATAGTAAGGAAGAGAAAGGAAACTCTGAACGCCCGTCGAGTTTATTTAAAGTCAATAGAAGATTATCATCAAGTTTTGCTTATTTTGACATTAGATCAGATGACACTAGTAGAACATGTTCTTGCCAAATATGA 2076 0.4249 MSLLFNFFPLLFLLLLFPSFSFSATPCPLNITLLRHIGDGSRPSTTSGSQCHYILQALHLVQADYLHRTGFFVPPPNTSESCWSSFQSFIDEFQPNFDIRPSCGFQTSWISQGCMNITTKQQFEQQVSPPALLSLQSNCNVSLDNNAPCALCTAKRSEVLTSLTGVTVSNVSDCRSYTAIYAASLSDQFGPTNIGTAKCLFGLDFSSSSGSGSKHHTIVIVLVTVFVFLGLLLFGGFWGYFRYKKKKSGNSKGNSSRTEIILGLSSGLDNMNQSTTLIRFSFDEIKKATRNFSRDNIIGSGGYGNVYKGLLSDGSEVAMKRFKNCSVAGDASFSHEVEVIASVRHVNLVALRGYCTATTNLEGHQRIIVTDLMENGSLYDHLFGSSKKKLSWPIRQKIALGTARGLAYLHYGAQPSIIHRDIKASNILLDEKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGVLLLELLSGRKALETNEDGQPSAFSDLAWSLVRNNRALDVVEDGMPESGTPEILEKYVLVAVLCSHPQLYARPTMDQVVKMLETDDEPLPSVVERPIPFIAGRLDIEKSTNSNSGQLCSPTGYQAYTLQLQNRRASTCNEEDEENSEGVSNSMEAEGNSERVSNSKEEKGNSERPSSLFKVNRRLSSSFAYFDIRSDDTSRTCSCQI* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1555 691 MobiDBLite consensus disorder prediction 644 658 - -
Psa3g1555 691 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 18 620 - -
Psa3g1555 691 SUPERFAMILY Protein kinase-like (PK-like) 269 568 IPR011009 -
Psa3g1555 691 CDD STKc_IRAK 298 567 - -
Psa3g1555 691 ProSiteProfiles Protein kinase domain profile. 292 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g1555 691 Pfam Protein kinase domain 293 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g1555 691 Gene3D Transferase(Phosphotransferase) domain 1 373 573 - -
Psa3g1555 691 PANTHER OS01G0253100 PROTEIN 18 620 IPR045271 GO:0004714|GO:0006468
Psa3g1555 691 SMART serkin_6 292 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g1555 691 Gene3D Phosphorylase Kinase; domain 1 263 371 - -
Psa3g1555 691 MobiDBLite consensus disorder prediction 618 663 - -
Psa3g1555 691 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Psa3g1555 691 Pfam SPARK 24 174 IPR043891 -
Psa3g1555 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1555 Psa-Chr3 140245213 140247453 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1555 13 612 Receptor kinase-like Gene Family AT2G48010 59.867 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Psa3g1555 Pkinase 3.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1555 - - gmx:100819453 890.567