Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1548 ATGACTGGTACTAATCAACTCAACCCCAGTGAATCCAGGAGTGTTGTTCCATTGAATACGTATGTGCTTATTTCCAATTTCAAGCTTGCTTACAATCTTCTAAGACGAGCAGATGGAACGTTCAACCGAGATTTAGCAGAGTTTCTCGACAGAAAAGTGCCGGCAAACGCGATTCCTGTTGATGGGGTATTTTCGTTTGATCATGTAGATCGAAACAGTGGTTTATTCAACCGAGTTTATCTACCATCTTCAGAGAATGAATCTCAATGGGGTGTTGTAGATTTGGAGAAGCCATTGAGCACTACAGAGATTGTTCCTGTTATAATATTCTTCCATGGAGGAAGCTTCTCTCATTCATCAGCAAACAGTGCTATCTACGACACGTTTTGCAGAAGACTGGTGAGCCTTTGTAAAGCCGCGGTTGTTTCGGTTAATTACCGACGATCGCCGGAGCATCGGTTTCCATGTTGTTATGAGGATGGTTGGAATGCACTCAAATGGGTGAAATCAAGAAAGTGGCTTCAAAGTGGGAAGGAGAAGAAAGTTTATGTTTACATGGCAGGTGATAGTTCAGGTGGCAACATTGTTCATCATGTAGCAGTGAAAGCTTCAGAAGAGAAAATTGAGGTTTTAGGGAACATTCTTCTTCATCCATTGTTTGGTGGTGAAAAGAGAACAGGTTCTGAAATTAGATTAGATGGAAAGTACTTTGTTAGATTACAAGACCGTGATTGGTATTGGAGAGCTTTTTTACCAGAAGGTGAAGATAGAGACCACCCTGCTTGTAACCCGTTTGGTCCTAAAGGGGTAAAAAATCTAAAAGGACTCAACAAGTTTCCCAAAAGTCTTGTTTGTGTTGCTGGTTTGGATCTTTTACAAGATTGGCAATTGGCTTATGTGGAAGGTCTGAGGAGTTTTGGTCAAGAGGTTAAACTTCTTTTCCTTAAGGAGGCTACTATTGGTTTTTACTTCTTGCCTAATAATGATCATTTCTATTGCCTTATGGACGAAATCAAGAACTTTGTTAATCCTAATTGTTAA 1041 0.4015 MTGTNQLNPSESRSVVPLNTYVLISNFKLAYNLLRRADGTFNRDLAEFLDRKVPANAIPVDGVFSFDHVDRNSGLFNRVYLPSSENESQWGVVDLEKPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVSLCKAAVVSVNYRRSPEHRFPCCYEDGWNALKWVKSRKWLQSGKEKKVYVYMAGDSSGGNIVHHVAVKASEEKIEVLGNILLHPLFGGEKRTGSEIRLDGKYFVRLQDRDWYWRAFLPEGEDRDHPACNPFGPKGVKNLKGLNKFPKSLVCVAGLDLLQDWQLAYVEGLRSFGQEVKLLFLKEATIGFYFLPNNDHFYCLMDEIKNFVNPNC* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1548 346 Pfam alpha/beta hydrolase fold 108 323 IPR013094 GO:0016787
Psa3g1548 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Psa3g1548 346 PANTHER ARYLACETAMIDE DEACETYLASE 2 343 - -
Psa3g1548 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Psa3g1548 346 PANTHER GIBBERELLIN RECEPTOR GID1C-LIKE PROTEIN 2 343 - -
Psa3g1548 346 Gene3D alpha/beta hydrolase 1 343 IPR029058 -
Psa3g1548 346 SUPERFAMILY alpha/beta-Hydrolases 75 343 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1548 Psa-Chr3 139782337 139784206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1548 1 343 Carbohydrate Esterase AT3G63010 72.674 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1548 K14493 - gmx:100788435 596.275