Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1513 ATGAGCTATCAAATGAATGGTCAAGATGCACGCAGAGATTTAAAAAGAAAGCTCCCTCAAATGGATCGAGGGCAAGAACGGAGATCTTATAATATGAATTCTACACCTTATGATTGGAATGCACTTCCTCCGGGTTGGTTAGACTGCCCAGCACATGGGCAAGAACTAGGTTGCTTAATCCCTTCAAAGGTTCCACTTGGTGAATCCTTCAATGATTACATTCCGAATAAAAAATATACCCCCAAGCAAGCAATTCTTCAACAGAGAGCTTTAGGTAGAGAACTTGGTTTAGTGATTGATCTGACAAATACTACTCGTTACTATCCATTATCAGATTGGACAAAAGAAGGGATTGGCCATGTCAAGATAAGATGCAAAGGAAGAGATTCTGTACCTGATGATGAATCTGTACAAAAGTTTTGCAATGAGGTTCTGGATTTTTGCTCCCGGAGATCAAACACAAAGAAATATATACTTGTACACTGCACTCATGGGCATAATCGTACAGGCTATATGATTGTTCATTTTCTTGTGCGTACAGAATCACTATCTGTCACTGAGGCAATAAATAAATTTGCACAGGCACGCCCCCCAGGAATTTACAAACAGGATTACATTGATACCCTGTACATGTTTTTTAATGAAAAGAAGCCTGAAAGTCTTGTTTGTCCACAAACTCCAGAATGGAAGAGCCTCCCTGATCCTGACGTTCATGATGTGTCTTTCTCAGCTACAGACAATCGTGCAGACATTTTGCAGCAGGAGAATATCGTGAGGAATGGAGTAATGACAAATGATGATGTTTTGGGAGATCCCATTCCTTCAAACCAGCTTCGTACAATGCAAGAACTTTGTTATCAACTGCTCAAGTTGGGCAAAGGGGGAAGAGGAGTTTTGTACTTTCCCGGATCACACCCTGTTTCTCTGAACAGGGAGAATTTACAACTCTTAAGACAGCGGTATTACTATGCCACATGGAAAGCTGACGGGACACGGTATATGATGCTAATCACTGGGGATGGATGTTATCTGATTGACAGAAAATTTCATTTCCAAAGGATCTCTATGCGGTTTCCTTGCAAATACTCAAATGGGGGTACACCCGAAAGGAATCACCACTACACATTACTTGACGGGGAAATGATTATTGACACGGATCCACATACTCATAAGCAAGAAAGAAGATACCTCATTTATGATTTGATAGCAATCAATCAAGTCTCTCTGACAGAGATGCCATTCTATGAAAGGTGGAAATTGCTGGAGAAAGAAGTAATTGAACCCCGTAACATGGAACGCGAAGCCCTATCCAAGAGTATAAGTCCTTATTATAGATACGACTTCGAACCATTTGGTGTGAGGAGGAAGGGTTTTTGGTTACTATCTACCGTGTCAAAGCTCCTTCATAAATTCATTCCACAACTCTCACACTCATCAGATGGTCTTGTATTCCAGGGTTGGGATGATCCATATGTCCCTCGCACGCATGAAGGTCTTCTGAAGTGGAAATACCCTGAAATGAACTCTGTTGATTTCCACTTTGAGGTGGGAGCTGATGGTCGACCCCTGCTTTTTCTGTTTGAACGTGGAAAGAAGAAGTTAATGGAAGGGAATACTGTTATTTTTAAAGATTCGGAAGATATTTCTTCCTATTCAGGGAGAATAATTGAGTGCTACTGGGATGCTGCAGAGCATCACTGGGTCTGTATGCGGATCAGAGCTGATAAAGCAACTCCAAATGAGATCAATACTTATAGAAAGGTAATGCGAAGCATAAAGGATAATATCACAGAAGAAGTCGTGTTGAAGGAGATTAATGAGATCATTCGACTACCCTTGTATGCAGACAGAATACAGAGGGATATCAAGGCTCACCAGCATATGGTCTCTTCGCGGCGCAAGTGA 1905 0.4136 MSYQMNGQDARRDLKRKLPQMDRGQERRSYNMNSTPYDWNALPPGWLDCPAHGQELGCLIPSKVPLGESFNDYIPNKKYTPKQAILQQRALGRELGLVIDLTNTTRYYPLSDWTKEGIGHVKIRCKGRDSVPDDESVQKFCNEVLDFCSRRSNTKKYILVHCTHGHNRTGYMIVHFLVRTESLSVTEAINKFAQARPPGIYKQDYIDTLYMFFNEKKPESLVCPQTPEWKSLPDPDVHDVSFSATDNRADILQQENIVRNGVMTNDDVLGDPIPSNQLRTMQELCYQLLKLGKGGRGVLYFPGSHPVSLNRENLQLLRQRYYYATWKADGTRYMMLITGDGCYLIDRKFHFQRISMRFPCKYSNGGTPERNHHYTLLDGEMIIDTDPHTHKQERRYLIYDLIAINQVSLTEMPFYERWKLLEKEVIEPRNMEREALSKSISPYYRYDFEPFGVRRKGFWLLSTVSKLLHKFIPQLSHSSDGLVFQGWDDPYVPRTHEGLLKWKYPEMNSVDFHFEVGADGRPLLFLFERGKKKLMEGNTVIFKDSEDISSYSGRIIECYWDAAEHHWVCMRIRADKATPNEINTYRKVMRSIKDNITEEVVLKEINEIIRLPLYADRIQRDIKAHQHMVSSRRK* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1513 634 Gene3D - 504 596 IPR012340 -
Psa3g1513 634 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 42 229 IPR029021 -
Psa3g1513 634 SUPERFAMILY Nucleic acid-binding proteins 506 619 IPR012340 -
Psa3g1513 634 PIRSF mRNA_capping_HCE 29 634 IPR017074 GO:0004484|GO:0006370|GO:0140818
Psa3g1513 634 Gene3D Protein tyrosine phosphatase superfamily 17 235 IPR029021 -
Psa3g1513 634 ProSiteProfiles Dual specificity protein phosphatase domain profile. 69 219 IPR020422 GO:0006470|GO:0008138
Psa3g1513 634 ProSitePatterns Tyrosine specific protein phosphatases active site. 160 170 IPR016130 GO:0016311|GO:0016791
Psa3g1513 634 MobiDBLite consensus disorder prediction 1 32 - -
Psa3g1513 634 Pfam mRNA capping enzyme, C-terminal domain 508 601 IPR013846 -
Psa3g1513 634 Gene3D DNA ligase/mRNA capping enzyme 264 503 - -
Psa3g1513 634 PANTHER MRNA-CAPPING ENZYME-LIKE 5 634 - -
Psa3g1513 634 PANTHER MRNA-CAPPING ENZYME 5 634 - -
Psa3g1513 634 CDD RNA_5'-triphosphatase 45 211 - -
Psa3g1513 634 CDD Adenylation_mRNA_capping 276 504 IPR001339 GO:0004484|GO:0005524|GO:0006370
Psa3g1513 634 MobiDBLite consensus disorder prediction 9 24 - -
Psa3g1513 634 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 279 504 - -
Psa3g1513 634 Pfam mRNA capping enzyme, catalytic domain 305 503 IPR001339 GO:0004484|GO:0005524|GO:0006370
Psa3g1513 634 Pfam Dual specificity phosphatase, catalytic domain 94 213 IPR000340 GO:0008138|GO:0016311
Psa3g1513 634 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 138 207 IPR000387 GO:0016311|GO:0016791
Psa3g1513 634 SMART dsp_5 75 215 IPR020422 GO:0006470|GO:0008138
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1513 31 624 Protein tyrosine phosphatase (PTP) family AT3G09100 62.292 0.0 776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1513 - K13917 mtr:MTR_7g094670 1172.15