Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1483 ATGATGGTTCCATCTCAGATATATCATGACAACATGAATGATGAAGCATGTGCTATCTGTAGAGATGGGGGAGATTTAATTTGTTGTGATAGCTGTCCTTCAGTTTTTCATCAAAGCTGCTTGAATATAGAAGAGCTTCCATCAGGTGATTGGCACTGCATTTTCTGTTGCTGTAAATTTTGTGGATTATTTAAAGAAAGTAAAAGACAAGATACTGCAAATAATCCAAACTATGGATGTGTGTTTTTCACATGTCAAACATGCAGGAAAAAATATCATGAATCTTGTTTTGACGCAAACACTAATGAGACAGTTCACTTCAATCGTGCATCTGTATGTGGAAAAATATGTCAACAGATATTTGAGAAGTTTGAAATACTTCTAAGGGGTAAACATGAAGTTGGAGATGGATTTTCTGTGACTCTATTTTGTAAATCACATGATATTCACTGGAGTGATTCAAAGATGGATGAGGCATTATCAATAATGTATGAATGCTTTCAACCTATTTTTGTCAATCATAATGCCAACAAGATTGATATGATCCCAAATATTTTATCTAGCCGCTGGTCAAGTTCTCCTTCAATTAATTATGCTGGATTTTTTACTGTACTTTTGGAAAATAGAGGCCAGGCGATTAGTGTTGCTACTATCAGGATTCATGAAAACCAGTATGCAGAGATGCCATTTATTGGAACACGCTATATGTATAGAAAAAGAGGAATGTGTCGTCGTCTCATGAATGCCATTGAATCGATATTAAGATTCTTGAATGTTGAGATGTTAATCATTCCATCTGCTCAAGAAGTATTGCACACTTGGATTTCTTGTTTTGGATTTGAGCCACTTGATATGAACACAAAAAATCTAATCAAGAACAAAAATGTGGTGAAATTCTTTGGAGTTGAAATGTTGCAGAAGAAGATAAACAAAGTGTGA 939 0.345 MMVPSQIYHDNMNDEACAICRDGGDLICCDSCPSVFHQSCLNIEELPSGDWHCIFCCCKFCGLFKESKRQDTANNPNYGCVFFTCQTCRKKYHESCFDANTNETVHFNRASVCGKICQQIFEKFEILLRGKHEVGDGFSVTLFCKSHDIHWSDSKMDEALSIMYECFQPIFVNHNANKIDMIPNILSSRWSSSPSINYAGFFTVLLENRGQAISVATIRIHENQYAEMPFIGTRYMYRKRGMCRRLMNAIESILRFLNVEMLIIPSAQEVLHTWISCFGFEPLDMNTKNLIKNKNVVKFFGVEMLQKKINKV* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1483 312 PANTHER PHD FINGER PROTEIN 12 9 311 IPR042163 GO:0003714|GO:0045892
Psa3g1483 312 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 9 311 - -
Psa3g1483 312 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 157 287 IPR016181 -
Psa3g1483 312 SUPERFAMILY FYVE/PHD zinc finger 8 63 IPR011011 -
Psa3g1483 312 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 81 IPR013083 -
Psa3g1483 312 ProSiteProfiles Zinc finger PHD-type profile. 14 59 IPR019787 -
Psa3g1483 312 SMART PHD_3 60 118 IPR001965 -
Psa3g1483 312 SMART PHD_3 16 57 IPR001965 -
Psa3g1483 312 Gene3D - 152 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1483 Psa-Chr3 135157477 135166456 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1483 16 309 PHD Transcription Factor Family AT1G05380 42.484 2.39e-76 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1483 - - mtr:MTR_7g095140 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1483 3 135157477 135166456 Psa3g1483 3 135157477 135166456 ECH