Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa3g1434 | ATGACAAGAGGAACGGGAGTAAAAGATCAAAAGCTTGAGAAACAATTCCAAAAACATATGGGGTGCATGGCAGGTTTCCTACACATCTTCGATCGCCATCACTCATTTCCTGTTAAAAGACTCAATTCCACGAAACCAACGGAACCGGAAACAAGCGGTAGTAACTCACCGGCTGAATCAACACCAGAAACAGAAACAGAAGCAACTCAACCGGAAAAACCGACGCTTCAGATTCTTCCAGTTTTCGATTTCAAAGAAGGAACAAAATCTTCATGGAAATTAGCCAGAGAAGCACCGAGACTATCATTAGATAGCCGAGCCGTGATGGATGCAAAAGGAACCATTCATCCAAAAGATGACGAAAAACGACGACGTTCCACTAGCGTTGTTGCAAAGCTCATGGGTCTCGAAGATTCTGATCCTAACCCCAACCCTAACCCTAACCCTAACCTTAACCCAAAGCTACAAAGATCAGCTTCGGAATCAACGGTTCACAGAGATCTATCTCATTCTCAACAGTATCGTTTCTTTGACACTACGAATTTCAAGTTAAAGCAATTCCAATTTGACAGTGGTTCATTGTTAAACGACACAGACTCAGATCTAACTGAGAAAACAGAACCAGTCAGAGGAATGATAACGAAACAAAAGAAATGTTTCTATGATTCTGCTGACTTTTTTCCTGGTCCGAAACAGAGTGTTTCTGTTTCCGTTCAAGGCGAGATTGAGAAACGGTTGAAGATGCGTGGGATTCACGAACCTTCTAAAGATCTCGAGACACTGAAACAAATCCTCGAAGCATTGCAGCTGAAAGGGCTTTTACATTCTAAGAAATTAACAAATCATAGAAACTTCGTCATGGAGAATGTGAATGATTCTCCTATAGTTCTTATGAAGCCAGGAAAATCCATTCATCGAACCGGTTGGACCGGGAATGATTCTCCACCACCAGGTTCCACTGTCCGGTCCAAACCAAAGACTCGAACTGATCATATGCAAGCGCAGGTTAAAAACAGAAACACGGTGAACTCCCCCACGCGCAGTCCTAACCGCGTGAGGAAGGTTACTAGCGTGGAGACACAGCGAAGTGTTGATCGCCGAAGAGTTTCTCCGGTTCAATCCCAGAAGATTAAGATTGAACCGAACCGACAATCACCGGTTCGGTCGCCGAGGATGAGAAAAGTTACAACTTGCCTAAAGGAAGAGAAAACCATGGCGGAAGATGAATCATCTACGGTTTCTGATAGTAGTTTCAGTACCTCTTCACAAACCGACACAGAGAGGTTAATTAAGGTGGAGGACCAATACAGAGAAGGGAAAGAGCTACTGCAGAGATGCGATAAATTACTCAACAGTATAGCTGAAATAACTGAGTTACAACAACCGAGTCCCGTATCAGTTCTTGACTCGTCGTTTTACAAAGACGACTCGTCGTGTTCACCATCTCCAGTAATGAAACGATGCATTGAATATAAAGATCTAGGAGCAGAGTCAGAAGAAGATGCTTGGAGTACAGCTTTGTGTTCAAACAAAACCAAGTCAGAGGATTACGATTTCGTATATGTTTCAGAAGTACTTCGGGCTTCTAACTACTTGCCCAAAGACAAAGACAATGACATGTTTCTGTTACTGGAACAGCAACAGTATCTCAAGGGAAACAACACTTCCAAAGTTTCCACTCTTCAGAGAAAGTTAATCTTCGACACCATTCATGAGATTCTCAACTGTAAACGCCGTTTGCCGCCGTGGAAGTTGGAGAACCTACCGTCGTTAGATAAAATCTGGTCGGAGTTTCGGAGGATACGGGAGAGAGAAGAGTCGGAGGATATGTTTGAGGTTATATGTGGAGTGTTGAAGAAGGACATGAATGGAGAGAATGAATGGGGTGAATGCCACGTGGAAATTGGAGATGTAGTGTTGGATATCGAACGGTTCATATTCAAAGATCTTATATGCGAAACCATTGGGGATCTAGCATTGTGTAGAGGAGTACCACGTAACAAAGTTTCGGTGCTTCGCAGGAAGTTAGAGTTTTATAATTAG | 2043 | 0.4302 | MTRGTGVKDQKLEKQFQKHMGCMAGFLHIFDRHHSFPVKRLNSTKPTEPETSGSNSPAESTPETETEATQPEKPTLQILPVFDFKEGTKSSWKLAREAPRLSLDSRAVMDAKGTIHPKDDEKRRRSTSVVAKLMGLEDSDPNPNPNPNPNLNPKLQRSASESTVHRDLSHSQQYRFFDTTNFKLKQFQFDSGSLLNDTDSDLTEKTEPVRGMITKQKKCFYDSADFFPGPKQSVSVSVQGEIEKRLKMRGIHEPSKDLETLKQILEALQLKGLLHSKKLTNHRNFVMENVNDSPIVLMKPGKSIHRTGWTGNDSPPPGSTVRSKPKTRTDHMQAQVKNRNTVNSPTRSPNRVRKVTSVETQRSVDRRRVSPVQSQKIKIEPNRQSPVRSPRMRKVTTCLKEEKTMAEDESSTVSDSSFSTSSQTDTERLIKVEDQYREGKELLQRCDKLLNSIAEITELQQPSPVSVLDSSFYKDDSSCSPSPVMKRCIEYKDLGAESEEDAWSTALCSNKTKSEDYDFVYVSEVLRASNYLPKDKDNDMFLLLEQQQYLKGNNTSKVSTLQRKLIFDTIHEILNCKRRLPPWKLENLPSLDKIWSEFRRIREREESEDMFEVICGVLKKDMNGENEWGECHVEIGDVVLDIERFIFKDLICETIGDLALCRGVPRNKVSVLRRKLEFYN* | 681 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa3g1434 | 680 | MobiDBLite | consensus disorder prediction | 410 | 425 | - | - | |
| Psa3g1434 | 680 | Pfam | Domain of unknown function (DUF4378) | 518 | 653 | IPR025486 | - | |
| Psa3g1434 | 680 | MobiDBLite | consensus disorder prediction | 306 | 374 | - | - | |
| Psa3g1434 | 680 | PANTHER | LONGIFOLIA PROTEIN | 7 | 678 | IPR033334 | GO:0051513 | |
| Psa3g1434 | 680 | MobiDBLite | consensus disorder prediction | 307 | 323 | - | - | |
| Psa3g1434 | 680 | MobiDBLite | consensus disorder prediction | 334 | 357 | - | - | |
| Psa3g1434 | 680 | MobiDBLite | consensus disorder prediction | 40 | 73 | - | - | |
| Psa3g1434 | 680 | PANTHER | OS11G0587300 PROTEIN | 7 | 678 | - | - | |
| Psa3g1434 | 680 | MobiDBLite | consensus disorder prediction | 402 | 425 | - | - | |
| Psa3g1434 | 680 | MobiDBLite | consensus disorder prediction | 38 | 78 | - | - | |
| Psa3g1434 | 680 | MobiDBLite | consensus disorder prediction | 358 | 373 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Psa3g1434 | Psa-Chr3 | 130724344 | 130727802 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Psa3g1434 | 92 | 678 | TRM (TON1 Recruiting Motif) Superfamily | AT3G63430 | 36.289 | 5.91e-91 | 290 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Psa3g1434 | - | - | lja:Lj1g3v4449210.1 | 660.218 |