Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1433 ATGAGTCTGGAAAAGAATCCTTGTGTATTTTTTGATGTATCAGTTGATGGAGATCCCGTTGAAAGAATTGTTATTGAGCTTTTTTCTAGCGTAGTTCCCAAGACAGCCGAGAATTTCCGGGCCCTGTGTACAGGAGAGAAGGGGATTGGAGAATCGACAGGGAAACCTTTGCATTATAAAGGAACAGGTTTTCATCGTATAATTAAAGGTTTTATGGCTCAAGGTGGTGATTTTTCAAGGGGCAATGGTACTGGTGGAGAAAGTATATATGGAGGAAAATTTGCAGATGAAAATTTCAAACTTAAACATGATGGACCTGGCGTTCTTTCTATGGCTAATAGTGGTCCTAACACCAATGGATCTCAGTTTTTTATTATATTCAAGCGCCAGCCTCATCTTGATGGGAAGCATGTTGTTTTTGGAAAAGTTACCAAGGGAATAGAGATTCTGAAGAAAATGGAGCAGTTGGGGACGTCAGACGGGAAACCTACCCAGCCAATTAAAATTGTTGATTGTGGCGAAGTCTCTAAAGCAAAAAGCCAGCATGCTGTTGAGAAGGAGAAAGGGAAAAGGAGAAAGTCAGTGAAATCCTTATCATCTGATGATAGCTCTGATGCTGACAAAAAAATAAGTAGAAAAAGAAAAATATCTTCCAAAGACAGGAGGAAGAGAAGGAGGAGATACTCATCATCTGATAGTGGCAGTGATAGTTATTCCTCAGATTCTGAATCTGATTCATCTTCAGATTCTGAATCAGATAAAGATTCATCGTCTTCTGATTCAAGTTCTTCTAGCTATGGGAAACACCAGAAGAGGAAGAGAAATAAACGCAGGCATGGTAAGAAGAGAAGTATTGGGCGAAAACAGAAAAGAAGCCAGCACAGTCGTAGAAGATCAAAACACAAGTCCAAAAGGAGTTCTGATGGTTCAAGTGATACAGAAAGTGAGAGTTCTAGTGCTAGTGACAGTAGTTCTGGTGACAGGAAAGCTGATCGCCGTGTTTCTGGTCGTAAAATACAAGCCGACAAAGTTAAAAATAATCAAGACATAGGAAAGCCATCTTCTAGCCTTCCCTTACAAAGTCAAACCATTCCAGATCTAGTGGTGGATCCCAAAGTTAGAATGCCTATGGACAAGCAATCACACGAAGAAGGTGAATTGTCTCCAGAAAATGGTGAATTTCTGAATAACGGGCATGATACTCAAGCTGAATTTAGTAAACCTGCTAATCATCGAGCTTATTCAGATGATTCAGATCACAATAGAGATGTGAGTCCTGGAAGAAGTCCTGCCAAGAGTTCTAGGGAGCTGAACCAAGGACGTGCTCTATCGGCTAGCCCTGATAAAAAATCCTCTGAACTTGCTGCAGCCGCCTCCAAACATGGCCAGGGCATTTCGAAAAGCCCTTCGCCAAATGGTAAGCGTGTTAAAAAAGGACGAGGCTTTACTGAGCGCTATGCCTTTGTACGCAGATATCGTACTCCATCTCCAGAGCGGTCTCCCCGTGCATATCGTTATGGGGATAGAAATGTTAGAAGAAACTTTGATAGAAATACAAGTTACAGAAACTATTCTGAGCGCTCACCACCACGACGTTTTCGAAGCCCACCAAGGGGAAACCGTCCCAGATATCAAAGCAGAAGAAGTCAGAGCAGGAGTATCTCCCGCAGTCCAGTACGAGGCCGTTATAGAGACAATGGTCGTGGACGGAGTCCAAAACGCAGTCTTAGCCCGGAAGACAGGCGACCTCCCATAAGTGACAGATTAAAATCTCGACTTGGTGCACGAGGTAATCAACAATCTCCAGACAGACAGAAGTCAAAGTCAAATTCGAGGAGCAATGGCATTTCTCGATCCAGATCCCCTGACATTACACCCCCAAAGCGTTATAATAAAAGGACTTCCATATCTCGTAGCAGGTCTAGATCAAGTTCTGCATCAGGACAGAAGGGTTTGGTTTCCTATGGAGATGCTAGTCCTGATTCCGGAGCTAGGTAG 1998 0.4299 MSLEKNPCVFFDVSVDGDPVERIVIELFSSVVPKTAENFRALCTGEKGIGESTGKPLHYKGTGFHRIIKGFMAQGGDFSRGNGTGGESIYGGKFADENFKLKHDGPGVLSMANSGPNTNGSQFFIIFKRQPHLDGKHVVFGKVTKGIEILKKMEQLGTSDGKPTQPIKIVDCGEVSKAKSQHAVEKEKGKRRKSVKSLSSDDSSDADKKISRKRKISSKDRRKRRRRYSSSDSGSDSYSSDSESDSSSDSESDKDSSSSDSSSSSYGKHQKRKRNKRRHGKKRSIGRKQKRSQHSRRRSKHKSKRSSDGSSDTESESSSASDSSSGDRKADRRVSGRKIQADKVKNNQDIGKPSSSLPLQSQTIPDLVVDPKVRMPMDKQSHEEGELSPENGEFLNNGHDTQAEFSKPANHRAYSDDSDHNRDVSPGRSPAKSSRELNQGRALSASPDKKSSELAAAASKHGQGISKSPSPNGKRVKKGRGFTERYAFVRRYRTPSPERSPRAYRYGDRNVRRNFDRNTSYRNYSERSPPRRFRSPPRGNRPRYQSRRSQSRSISRSPVRGRYRDNGRGRSPKRSLSPEDRRPPISDRLKSRLGARGNQQSPDRQKSKSNSRSNGISRSRSPDITPPKRYNKRTSISRSRSRSSSASGQKGLVSYGDASPDSGAR* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1433 665 MobiDBLite consensus disorder prediction 628 652 - -
Psa3g1433 665 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 4 397 - -
Psa3g1433 665 MobiDBLite consensus disorder prediction 175 665 - -
Psa3g1433 665 MobiDBLite consensus disorder prediction 410 426 - -
Psa3g1433 665 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Psa3g1433 665 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Psa3g1433 665 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Psa3g1433 665 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Psa3g1433 665 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Psa3g1433 665 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 4 397 - -
Psa3g1433 665 MobiDBLite consensus disorder prediction 214 228 - -
Psa3g1433 665 SUPERFAMILY Cyclophilin-like 4 175 IPR029000 -
Psa3g1433 665 MobiDBLite consensus disorder prediction 427 446 - -
Psa3g1433 665 MobiDBLite consensus disorder prediction 372 389 - -
Psa3g1433 665 MobiDBLite consensus disorder prediction 477 520 - -
Psa3g1433 665 MobiDBLite consensus disorder prediction 325 345 - -
Psa3g1433 665 MobiDBLite consensus disorder prediction 178 213 - -
Psa3g1433 665 CDD cyclophilin_ABH_like 7 173 - -
Psa3g1433 665 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 IPR020892 GO:0003755|GO:0006457
Psa3g1433 665 Gene3D - 1 182 IPR029000 -
Psa3g1433 665 MobiDBLite consensus disorder prediction 268 304 - -
Psa3g1433 665 MobiDBLite consensus disorder prediction 347 363 - -
Psa3g1433 665 Coils Coil 664 665 - -
Psa3g1433 665 MobiDBLite consensus disorder prediction 593 621 - -
Psa3g1433 665 MobiDBLite consensus disorder prediction 542 557 - -
Psa3g1433 665 MobiDBLite consensus disorder prediction 558 589 - -
Psa3g1433 665 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 17 173 IPR002130 GO:0000413|GO:0003755
Psa3g1433 665 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1433 Psa-Chr3 130678623 130684367 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1433 25 171 U-box Gene Family AT5G67530 48.322 1.97e-34 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1433 K09566 - gmx:100791082 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1433 3 130678623 130684367 Psa3g1433 3 130678623 130684367 ECH