Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1429 ATGTCTAACAATCATAATCTACAATATGATGGCACTTCATTCATCATTGATATCACCAACACCTTCACAAAAGTCACTTCTAAATACACCAATAATGCAAAAAGAAGGTGGCGTTTTGCATATACAGCTATATATTCTAGAAGGGTTATGCTTTCCCTTGCCCAAGAAGTTATATCCAGAAAAAATCCAAAACTCTTTCACACACAGTCTTCTAGCACCACTCTTGATGTAATTGAACCGCTCATTACTCGACATAACGGAACCGATCATTACTCATTGGTTTCTCATGATGTTGATAGAATCAAACTCGCTGATATGGTTAAGGACAAAAGCTTGAAGTCATTAGGTGAGTTTGGCGGAGTTGAAGGCGTTGCGCGTGTTCTTGGAACGGTTCCGAAAATGGGAATTGTGGGGAGTGATGATGATGTTTCGAGACGGATTGAGTTGTTTGGTTCGAATACTTACAAGAAGCCGCCCCCGAAAGGGCTTTTACATTTTGTGCTCGAGGCTTTCAATGATACAACTATTATTATCCTTCTGGTTTGTGCTGGTCTTTCCCTTGGTTTTGGTATAAAAGAACATGGACCAGGGGAAGGTTGGTATGAAGGTGGAAGTATATTTGTAGCGGTTTTTCTTGTGGTGGTTGTAAGTGCATTAAGCAATTTCAGACAAGAGAGACAGTTTCACAAACTGTCTAAGATAAGTAACAATATCAAAGTGAAAGCTGTGAGAAACGGAAGGCCGCAGAATATATCGATTTTTGACGTACTTGTGGGAGATATTGTGTCTCTCAAGATTGGCGATCAGATTCCGGCTGATGGAGTTTTTCTATCAGGTCATTCACTGCAGGTGGATGAATCTAGCATGACAGGTGAGAGCGACCATGTAGAGATTGAGCCTTTAAGAGAGCCTTTTTTGTTGTCGGGCGCGAAAGTGGTGGACGGATATGCTCAGATGCTTGTAACATCTGTTGGGAAAAACACTTCTTGGGGTCAAATGATGAGCTCGATATCGCGAGACACTAACGAGAGAACGCCCCTGCAAGCTCGTCTTGACAAGTTAACCTCTTCGATCGGGAAGGTTGGACTCGCGGTAGCGTTTCTCGTACTTCTAGTATTGTTGGTTCGTTATTTTACAGGTAATTCACAAGAAAAGAAAGGGAATAAAAAGTTTCAAGGAAGTGATAGCAATGTAAATGACGTTTTGAATTCTGTTGTGAGTATTGTTGCGGCTGCGGTTACTATTGTGGTTGTGGCAATCCCTGAGGGTTTGCCGTTGGCCGTGACGCTGACGCTTGCTTACTCGATGAAAAGAATGATGGCAGATCATGCCATGGTGAGGAAACTTTCTGCTTGCGAAACCATGGGATCTGCAACAGTTATTTGTACGGATAAAACAGGTACCTTGACATTGAATCAGATGAGAGTGACCAAGTTTTCTCTCGGCCTCGAAAATTTTATCGAAAATTTTTCCAATGCAATGACTCCTAATGTTCTTGAGTTATTCCACCAAGGGGTAGGCCTAAATACAACTGGAAGCGTCTATAAGCCGTCATCAGGATCCGAACCAGAAATTTCAGGTAGTCCGACAGAGAAAGCTATACTAATGTGGGCGGTATCAGATTTAGGTATGGACATGGATGAAATGAAACAGAAACATAAAGTCCTTCATGTTGAAACGTTTAACTCGGAGAAGAAACGAAGCGGCGTTGCAATAAGGAAGGACAGCGACAACCGAGTTCAGGTACATTGGAAAGGAGCTGCAGAGATGATACTTGCAATGTGTACAACCTATATTGATAGTAACGGCGCGAGGAAGTCCCTCGACAAAGAAGAACGGTTTAAAATCGAGAAGATGATTCAAGGCATGGCTGCTAGTAGCCTAAGATGCATTGCTTTTGCTCATACGGAGATTTCGGGTTCAGAAGAAAATGATTATATGATCGAAAGGGAGAAAAAGACTCTACAGGAAGATCGATTGACCTTGCTCGGCATTGTTGGCCTCAAGGATCCTTGTAGGCCAAACACAAAGAAAGCTGTGGAAACTTGCAAAGCTGCAGGAGTCGAAATTAAGATGATCACCGGCGATAACATATTCACCGCAAAGGCAATAGCAACAGAATGTGGAATATTAGATCCTAAGGATCATGCGAATGCTGGAGAAGTCGTCGAAGGTGTTGAATTCAGAAACTATACAGAAGAAGAGAGAATGGCGAAAGTTGATATTATCCGAGTGATGGCAAGATCGTCCCCTATGGACAAACTTCTGATGGTGCAATGCCTGAGAAAGAAAGGCCACGTAGTTGCGGTCACAGGCGACGGTACAAACGATGCACCTGCATTAAAAGAAGCCGATATAGGACTTTCAATGGGGCTCCAAGGAACCGAAGTCGCCAAAGAAAGTTCCGATATCGTTATCTTAGATGACAATTTCAATTCTGTCGCAACTGTTTTAAGATGGGGAAGATGTGTTTACAACAACATCCAGAAATTCATTCAGTTTCAACTAACAGTCAATGTTGCAGCACTCGTGATAAACTTCATCGCAGCAGTTTCTTCCGGGGATGTTCCCTTAACAACAGTTCAACTTCTTTGGGTGAATCTCATTATGGACACACTAGGTGCTTTGGCACTGGCAACAGAAAGGCCTACAAAGGAGTTAATGAAGAAAAAACCGATCGGTAGAACTGAGCCTCTTATCACAAACATCATGTGGAGAAACCTTCTAGCGCAAGCTTCATATCAGATAGCAGTTCTTCTCATCATGCAGTTCTACGGAAAATCGATTTTCAACTTTTCAACGAGTTCAACTCGCGAAGCATGGAGAAACTATACGTTTTCGAAGGCATTCTGA 2853 0.4248 MSNNHNLQYDGTSFIIDITNTFTKVTSKYTNNAKRRWRFAYTAIYSRRVMLSLAQEVISRKNPKLFHTQSSSTTLDVIEPLITRHNGTDHYSLVSHDVDRIKLADMVKDKSLKSLGEFGGVEGVARVLGTVPKMGIVGSDDDVSRRIELFGSNTYKKPPPKGLLHFVLEAFNDTTIIILLVCAGLSLGFGIKEHGPGEGWYEGGSIFVAVFLVVVVSALSNFRQERQFHKLSKISNNIKVKAVRNGRPQNISIFDVLVGDIVSLKIGDQIPADGVFLSGHSLQVDESSMTGESDHVEIEPLREPFLLSGAKVVDGYAQMLVTSVGKNTSWGQMMSSISRDTNERTPLQARLDKLTSSIGKVGLAVAFLVLLVLLVRYFTGNSQEKKGNKKFQGSDSNVNDVLNSVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADHAMVRKLSACETMGSATVICTDKTGTLTLNQMRVTKFSLGLENFIENFSNAMTPNVLELFHQGVGLNTTGSVYKPSSGSEPEISGSPTEKAILMWAVSDLGMDMDEMKQKHKVLHVETFNSEKKRSGVAIRKDSDNRVQVHWKGAAEMILAMCTTYIDSNGARKSLDKEERFKIEKMIQGMAASSLRCIAFAHTEISGSEENDYMIEREKKTLQEDRLTLLGIVGLKDPCRPNTKKAVETCKAAGVEIKMITGDNIFTAKAIATECGILDPKDHANAGEVVEGVEFRNYTEEERMAKVDIIRVMARSSPMDKLLMVQCLRKKGHVVAVTGDGTNDAPALKEADIGLSMGLQGTEVAKESSDIVILDDNFNSVATVLRWGRCVYNNIQKFIQFQLTVNVAALVINFIAAVSSGDVPLTTVQLLWVNLIMDTLGALALATERPTKELMKKKPIGRTEPLITNIMWRNLLAQASYQIAVLLIMQFYGKSIFNFSTSSTREAWRNYTFSKAF* 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1429 950 Gene3D - 459 816 IPR023214 -
Psa3g1429 950 PANTHER CALCIUM-TRANSPORTING ATPASE 21 933 - -
Psa3g1429 950 SUPERFAMILY Calcium ATPase, transmembrane domain M 119 936 IPR023298 -
Psa3g1429 950 Pfam Cation transporting ATPase, C-terminus 856 936 IPR006068 -
Psa3g1429 950 PANTHER CATION TRANSPORTING ATPASE 21 933 - -
Psa3g1429 950 SMART Cation_ATPase_N_a_2 117 191 IPR004014 -
Psa3g1429 950 SFLD p-type atpase 444 824 IPR044492 -
Psa3g1429 950 Pfam haloacid dehalogenase-like hydrolase 460 785 - -
Psa3g1429 950 ProSitePatterns E1-E2 ATPases phosphorylation site. 464 470 IPR018303 -
Psa3g1429 950 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 468 675 IPR023299 GO:0000166
Psa3g1429 950 SUPERFAMILY Calcium ATPase, transduction domain A 237 336 IPR008250 -
Psa3g1429 950 Gene3D - 169 925 - -
Psa3g1429 950 Gene3D - 472 671 IPR023299 GO:0000166
Psa3g1429 950 PRINTS P-type cation-transporting ATPase superfamily signature 285 299 - -
Psa3g1429 950 PRINTS P-type cation-transporting ATPase superfamily signature 462 476 - -
Psa3g1429 950 PRINTS P-type cation-transporting ATPase superfamily signature 664 675 - -
Psa3g1429 950 PRINTS P-type cation-transporting ATPase superfamily signature 686 696 - -
Psa3g1429 950 PRINTS P-type cation-transporting ATPase superfamily signature 771 790 - -
Psa3g1429 950 PRINTS P-type cation-transporting ATPase superfamily signature 795 807 - -
Psa3g1429 950 SFLD Haloacid Dehalogenase 444 824 - -
Psa3g1429 950 PRINTS Sodium/potassium-transporting ATPase signature 455 476 - -
Psa3g1429 950 PRINTS Sodium/potassium-transporting ATPase signature 582 600 - -
Psa3g1429 950 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 403 484 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa3g1429 950 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 206 378 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa3g1429 950 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 744 851 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa3g1429 950 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 110 931 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Psa3g1429 950 Gene3D - 139 338 - -
Psa3g1429 950 Pfam E1-E2 ATPase 238 440 - -
Psa3g1429 950 SUPERFAMILY HAD-like 460 876 IPR036412 -
Psa3g1429 950 CDD P-type_ATPase_Ca_PMCA-like 143 904 - -
Psa3g1429 950 Pfam Cation transporter/ATPase, N-terminus 119 186 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1429 Psa-Chr3 130085331 130088238 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1429 33 931 Primary Pumps ATPases AT3G63380 70.543 0.0 1207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1429 K01537 - gmx:100790034 1425.61