Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1408 GAATAACCCACGTTGCTGGTGATGCTACTAAGTTTGTTCCTTCCGGAGATGCTGTCATGATGAAGTGGCTATGTTCGGGTTTCTCGGACGAGCTATGCACCAAGATGATGAAGAACTGCCATAAGGCACTTCCAGCAGAGGGAAAGTTGATAATATGTGATCCATTGTTGCCGGAGCTGACCGATGAAAGCACGAGAACAAAGGCAATACTTGGTGGTGATGTATTCATGATGACTATGTATGGTACTAAGACTACTCGAACTGAGAAGCAGTTCAAAGAGCTAGGCATTGCTGCTGGATTTTCCAGCTTCCGTGTATTCTATATTGACGCATATCTCGCGTTCATGGAGTTCCACAAGTAA 362 0.4503 ITHVAGDATKFVPSGDAVMMKWLCSGFSDELCTKMMKNCHKALPAEGKLIICDPLLPELTDESTRTKAILGGDVFMMTMYGTKTTRTEKQFKELGIAAGFSSFRVFYIDAYLAFMEFHK* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1408 119 Gene3D Vaccinia Virus protein VP39 1 106 IPR029063 -
Psa3g1408 119 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 119 IPR016461 GO:0008168
Psa3g1408 119 Pfam O-methyltransferase domain 1 101 IPR001077 GO:0008171
Psa3g1408 119 PANTHER O-METHYLTRANSFERASE 1 118 IPR016461 GO:0008168
Psa3g1408 119 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 116 IPR029063 -
Psa3g1408 119 PANTHER OS02G0823400 PROTEIN 1 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1408 Psa-Chr3 126408068 126408511 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1408 1 119 Monolignol Biosynthesis Gene Families AT3G53140 55.000 7.10e-46 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1408 - - aprc:113853000 157.532