Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1404 ATGGCGCTTGCTGGTTCTGAAATGGAGCTTAAACTTCAAGCTATAAACAACAAGAAAACCGCAATTTCAAGAAGCTGGATTTTACTTGACCGTGATGGAAGAGACATGGTATTGGATGTGGATAAGTATGCTATCATGCGTCTGGTTGAAATTCACGCAAGAGATCTTCGAATTATGGATCCTCTTCTTTCTTATCCTTCTACCATTCTTGGTAGAGAGAAAGTCATTGTTCTCAATCTAGAGCATATAAAAGCTATTATCACTGCCGAAGAAGTTTTGGTTAGAGACCCAATGGATGAAGATGTTGTGCCTGTTGTTGAAGAGCTTCGAAGAAGGTTGCCAGTGAAAGGAGAAGAAGAGTCTTGTGCTCAAGACGGCGGAGAAGAAAATGAATTTCCATTTGAGTTTCGGGCGTTGGAAGTTGTATTAGAGGCAACTTGTAGTTTCCTTGATGCAAGGACAAGAGAGTTGGAGACTAATGTTTATCCAGCTTTGGATGAACTAACATCTAAGATCAGTAGTCGTAATTTGGATAAAGTTCGGAAATTAAAAAGTGCGATGACTAGGTTAACAAATCGTGTTCACAAGATAAGAGAGGAACTAGAAAATCTACTTGATGATGATGATGACATGGCTGAACTTTACTTATCAAGAAAGTTATCTATTTCATCCTCTCCCTCATCGAGTAACTCTGATGGACCCAATTGGCATCACAGTCCAAATCAAGGTTCGAAAATACACCGATCAAGCCGAGGAAGCGCAACAACACTTCACGGAGAAGAAAATGATGTTGAAGAGCTTGAAATGTTACTAGAGGTTATTAAATTCTTCGTTTTACTTTTTCCATTCCTAATTTAG 858 0.3904 MALAGSEMELKLQAINNKKTAISRSWILLDRDGRDMVLDVDKYAIMRLVEIHARDLRIMDPLLSYPSTILGREKVIVLNLEHIKAIITAEEVLVRDPMDEDVVPVVEELRRRLPVKGEEESCAQDGGEENEFPFEFRALEVVLEATCSFLDARTRELETNVYPALDELTSKISSRNLDKVRKLKSAMTRLTNRVHKIREELENLLDDDDDMAELYLSRKLSISSSPSSSNSDGPNWHHSPNQGSKIHRSSRGSATTLHGEENDVEELEMLLEVIKFFVLLFPFLI* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1404 285 CDD Mrs2_Mfm1p-like 26 272 IPR039204 -
Psa3g1404 285 MobiDBLite consensus disorder prediction 225 257 - -
Psa3g1404 285 Gene3D Magnesium transport protein CorA, transmembrane region 101 277 - -
Psa3g1404 285 Coils Coil 180 207 - -
Psa3g1404 285 MobiDBLite consensus disorder prediction 225 259 - -
Psa3g1404 285 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 13 273 IPR039204 -
Psa3g1404 285 PANTHER MAGNESIUM TRANSPORTER MRS2-LIKE PROTEIN 13 273 - -
Psa3g1404 285 Gene3D - 9 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1404 Psa-Chr3 126275163 126276547 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1404 18 272 MRS2 Gene Family AT5G09690 67.181 1.45e-108 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1404 K16075 - gmx:100799368 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1404 3 126275163 126276547 Psa3g1404 3 126275163 126276547 ECH