Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1389 ATGTTTCAACTCGATGTGCTTTTTCTGTATCTCTTACCCGTTCTCTTGTTAATCCTACCCATAGTACTCTTCTTCTTAACAAAACAAAGACCATCATTTTCTTCATCTTCAACCAACAACAACATCACCATCCCGAAATCATACCCACTTATCGGTGCTTACTTATCTTACAGAAACAACTTACACCGCCGCATCGAATGGCTCTCTGACATCGTCCAAATCTCTCCCTCTGCCACTTTCCAACTCGGCGGTGCATTAGGTAAACGCCAAATCATCACCGGAAACCCATCCACCGTTCAACACATTCTCAAAAACCAATTTTCCAATTACCAAAAAGGCACATCCTTCACAAATACCCTCTCCGATTTCCTAGGGACAGGAATCTTCAACTCAGACGGCCAAAACTGGAAGTTTCAAAGACAAGTCGCAAGCCACGAATTCAACACGAAATCAATCCGTAACTTCGTAGAGCACATAGTCGACACAGAACTCACCAACCGTTTAATCCCAATCCTCAATTCATCAACCCAAACAAACCAAATCCTCGACTTCCAAGACATTCTCCAACGTTTCACTTTCGACAACATCTGCAAAATCGCGTTTGGTTTCGATCCAGAGTATCTAACTCCGTCAACTAACCGAACAAAATTCGCACTAGCATACGAAGACGCAGTGGAAATAAGCTCAAAACGTTTCCGTGTACCCTTACCAATCATATGGAAAATAAAAAAATACTTCAACATAGGTTCGGAAAAGCGTCTCAAAGAAGCAGTAACAGAAGTACGAGAATTCGCGAAAAATATAGTACGAGAAAAAAAACGAGAGTTAGAAGAAACATCATTGCTTCAAACAGATGACATGTTATCGCGTTTCTTAAGTTCGGGTCATTTCGAAGAAGAGTTTGTTACTGATATGGTAATAAGTTTTATTTTAGCGGGAAAAGATTCAAGTTCAGCTGCATTAACGTGGTTTTTCTGGCTATTATGGAAGAATCCACGTGTTGAGGAAGAGATTGTGAAGGAAGTGAATGAAAAATCTGAGTCGTTGGTTTATGATGAAGTGAAGGAAATGGTTTATACGCATGCTGCGTTGAGTGAGAGTATGAGATTGTATCCACCTGTGCCGTTGGATAGTAAGGAAGCTATAAACGACGATGTTTTACCGGATGGGAGGGTTGTGAAGAAAGGGACGAAAGTGACTTATCATGTGTATGCGATGGGGAGGATGAAGAGTTTGTGGGGGGATGATTGGGCTGAGTTTAGGCCGGAGAGGTGGTTGGAGAGAGATGAGGTGAATGGGAAGTGGGGTTTTGTGGGGAGAGATATGTATTCTTATCCGGTTTTTCAGGCTGGGCCTAGGGTTTGTTTGGGGAAGGAAATGGCTTTTATGCAAATGAAGAGGATTGTTGGTGGGATTGTTGGGAAGTTTAAGGTGGTTCCTGAGGGGAATATGGGTGATCATCCTGGTTTCATTTCTTTTTTGACTTCGCAGATGGAAGGTGGATTTCCTGTCACTATTCAGAAGGTTACTTGA 1533 0.4214 MFQLDVLFLYLLPVLLLILPIVLFFLTKQRPSFSSSSTNNNITIPKSYPLIGAYLSYRNNLHRRIEWLSDIVQISPSATFQLGGALGKRQIITGNPSTVQHILKNQFSNYQKGTSFTNTLSDFLGTGIFNSDGQNWKFQRQVASHEFNTKSIRNFVEHIVDTELTNRLIPILNSSTQTNQILDFQDILQRFTFDNICKIAFGFDPEYLTPSTNRTKFALAYEDAVEISSKRFRVPLPIIWKIKKYFNIGSEKRLKEAVTEVREFAKNIVREKKRELEETSLLQTDDMLSRFLSSGHFEEEFVTDMVISFILAGKDSSSAALTWFFWLLWKNPRVEEEIVKEVNEKSESLVYDEVKEMVYTHAALSESMRLYPPVPLDSKEAINDDVLPDGRVVKKGTKVTYHVYAMGRMKSLWGDDWAEFRPERWLERDEVNGKWGFVGRDMYSYPVFQAGPRVCLGKEMAFMQMKRIVGGIVGKFKVVPEGNMGDHPGFISFLTSQMEGGFPVTIQKVT* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1389 510 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1389 510 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1389 510 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1389 510 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1389 510 Pfam Cytochrome P450 45 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1389 510 PANTHER CYTOCHROME P450 13 507 - -
Psa3g1389 510 PANTHER CYTOCHROME P450 94A2-LIKE 13 507 - -
Psa3g1389 510 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1389 510 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1389 510 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1389 510 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1389 510 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1389 510 SUPERFAMILY Cytochrome P450 40 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1389 510 Gene3D Cytochrome P450 29 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1389 Psa-Chr3 125049892 125051966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1389 14 508 Cytochrome P450 AT5G63450 46.386 4.49e-159 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1389 K20769 K13407 ag:AAD10204 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1389 3 125049892 125051966 Psa3g1389 3 125049892 125051966 ECH
Psa3g1389 3 125049892 125051966 Psa6g1302 6 57631599 57633987 PCT