Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1373 ATGGGTAACAATTTACATCAACTACTCAGAAGTCTTTGTTTCAATACTCATTGGAATTATGCTATCTTTTGGAAGCTCAAATATTGTGCTCCAAATCCAATGATCTTAACATTGGAGGATGCTTACTATGACAATTCAGATTATTTCGACTCTTCAGAAAATAAGTACGGTCAAAAGACCTTGGATCAGATTAAGGGTGGGAAATTTTCGCACGAGGCTTTGGGGTTAGCTGTGGCGAAAATGTCATATAATGTATACTCATTAGGGGAAGGCGTTGTTGGACAGGTAGCTGTTACTGGAAAACAACGGTGGATCTGTGCAGATGATCAAGCAACAAGTTCTGGCTTGTCTTTTGAGTTTGATGATTTGTGGCAAACTCAGTTTTCTGCTGGAATTAGGACAATTGTTGTTGTGTCTATAGTCCCACTCGGCGTTGTTCAGCTTGGTTCTCTAATAAAAGTGAATGAAGATATGGGGGTTATTAATCATATAAGAAATCTTTTTTTGTCTACTCAAGATTACTTGATAGACCACATTCCTAGTCAAATACAACGTAGTTTGAAGAGCTCTTCATCTCAGCAGGATATCTTGAAGGAAAAATCATCTTCAGATATTATGCCTGCATCCATGACGAATGAAACAGTGGATGTTTTGATGCCCCTTCAATGTTCTGGGAGGAACAGTGCAACTAATTCTGCATATTGGGAAATGGGCGATGATGTGGTCAAGCACGAAGGACCCGAGCTCAATAGTGATGCGAGTCCCATTTGGCTTCAGTCGGCGTTTGATATGATTAATGTGGAGCATCCGAAATTTGGAGAGGTAAGACCTCTAAGTGCGAGGGAGTGTGCAGGGAGCAGTGATGGCTGCAAAAATATGAAATTGGAATCGGAACAAAATCTATCATCATTTTTGAACAATTCTGTTATAAATAATGATGGCGTCGGTGATTTGATACACCATTCAGAAAAGGCCAGAGTCGATTCTGCATGCTTTCCGACAGATTTTCTTGATGCATATGTTTCTGAAAGTGACAAGTCTCGTAAACACTGCGAAAAGTCAGAGTTTTGGACTGTGCCTTGTGGCAAGGATACCTCCTATACAGAGTTGAGTTTTCCTGCTGGCTGTGAACTACACGAAGCACTTGGACCAGCATCTTTGAAAGGGAGTAAATATTTTGATATGCTGGCACAGGTTAATCAAGATGTGAAAATTGCGGATGTGCCAAATGTAGTTAACACTAGTCAATCAACTCCAGAGCATCTTTTGGAAGCAATGGTGGCCAACATTTGTCACAGTAGTAATAATGATGTTAATAGTGAATCATCATTTTATAGATCAAAGCAATCTGCAATAAGTTCTGGCAAAAAACCTGAAGTTTCTATTCAAAATGTGCATACTGTTAATCCAGAAAGCTATTCAATAGATCATCCTTCTCTTTTCAGAGAGGAAAAACACCATTGTTTGAGCTCATCGTCAGGGATATGCGGTGTTATGTCATCTAAAGGCATTTCTTCTATATGTCCTAGTGCTTGTAGTGAGCCACTCGAACGGTCATCTGAACCATCTAAGAACAGCAAGAAGAGGGCTAGACCTGGAGAAAGTTGCAGACCTCGGCCAAGAGACAGGCAACTGATCCAAGATCGAATTAAGGAGCTGAGAGATTTGGTTCCAAATGGTGCAAAGTGCAGTATTGATTCACTACTGGAGCGCTCAATAAAGCACATGCTCTTTCTGCAAAGCGTAACTAAGCACGCTGACAAGCTAACAAAATTTGCTCTTTCTAAATCAAAGCTGCATCATGTGGAAGCAGACATTCATGGATCCTCTAGTAGTGAGCAGGGTTCAAGTTGGGCAATGGAGGTAGGGGGTCATCTAAAAGTTCATTCAATATTAGTGGAGAATCTTAGCAAGAATGGACAGATGCTTGTTGAGATGCTATGTGAAGAGTGGAGCTATTTTCTGGAAATAGCAGAAGCCATAAGAAGCTTAGGCCTTACAATTTTGAAGGGTGCAACAAAAACTCGCGATGAGAAGATGTTAATATGCTTTATTGTTGAGGTTGAAAACAACAAAAATGTACACCGATTGGACATCTTGTGGCCGCTTGTTCAGATACTGCAATCCAAGAGCACTGTGCAGCAACAGTAA 2151 0.4054 MGNNLHQLLRSLCFNTHWNYAIFWKLKYCAPNPMILTLEDAYYDNSDYFDSSENKYGQKTLDQIKGGKFSHEALGLAVAKMSYNVYSLGEGVVGQVAVTGKQRWICADDQATSSGLSFEFDDLWQTQFSAGIRTIVVVSIVPLGVVQLGSLIKVNEDMGVINHIRNLFLSTQDYLIDHIPSQIQRSLKSSSSQQDILKEKSSSDIMPASMTNETVDVLMPLQCSGRNSATNSAYWEMGDDVVKHEGPELNSDASPIWLQSAFDMINVEHPKFGEVRPLSARECAGSSDGCKNMKLESEQNLSSFLNNSVINNDGVGDLIHHSEKARVDSACFPTDFLDAYVSESDKSRKHCEKSEFWTVPCGKDTSYTELSFPAGCELHEALGPASLKGSKYFDMLAQVNQDVKIADVPNVVNTSQSTPEHLLEAMVANICHSSNNDVNSESSFYRSKQSAISSGKKPEVSIQNVHTVNPESYSIDHPSLFREEKHHCLSSSSGICGVMSSKGISSICPSACSEPLERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRDLVPNGAKCSIDSLLERSIKHMLFLQSVTKHADKLTKFALSKSKLHHVEADIHGSSSSEQGSSWAMEVGGHLKVHSILVENLSKNGQMLVEMLCEEWSYFLEIAEAIRSLGLTILKGATKTRDEKMLICFIVEVENNKNVHRLDILWPLVQILQSKSTVQQQ* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1373 716 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 352 716 IPR043561 GO:0003700|GO:0006355
Psa3g1373 716 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 347 IPR043561 GO:0003700|GO:0006355
Psa3g1373 716 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 347 - -
Psa3g1373 716 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 352 716 - -
Psa3g1373 716 MobiDBLite consensus disorder prediction 515 544 - -
Psa3g1373 716 MobiDBLite consensus disorder prediction 520 544 - -
Psa3g1373 716 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 168 IPR025610 -
Psa3g1373 716 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 530 579 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1373 Psa-Chr3 122982358 122988944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1373 1 711 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 39.304 8.84e-147 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1373 - - mtr:MTR_7g096650 975.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1373 3 122982358 122988944 Psa3g1373 3 122982358 122988944 ECH
Psa3g1373 3 122982358 122988944 Psa6g1292 6 56644575 56648467 PCT