Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1323 ATGAAGAGTCTTCAAGAGAGGAAGGAGCGGCGGACTGTCTTGGAAAAGAAGTTGGCTGATGCAGATGTCTCCGAGGAAGATCAAAATAACCTACTTAAATTTCTAGAGAAGAAGGAAACTGAATATATGCGTCTTCAGAGGCATAAAATGGGTGTTGAGGATTTTGAGATGTTGACTATGATTGGAAAAGGCGCATTTGGGGAGGTCAGAGTCTGCAGGGAAAAGACTACGGATCATGTATTTGCAATGAAAAAGCTAAAGAAATCAGAAATGCTTCGAAGAGGCCAGGTTGAACATGTTAGAGCGGAGAGGAATCTCCTTGCAGAGGTTGACAGCAATTGCATAGTCAAACTTTATTGTTCTTTCCAGGATGATGATTATCTATATCTTATTATGGAGTATCTACCGGGAGGGGATATGATGACTCTACTTATGAGAAAGGATACATTGACCGAAGACGAAGCCCGATTTTATGTAGGAGAAACAGTTCTGGCTATTGAATCTATACATAAACACAATTATATACATAGGGATATTAAGCCTGATAACTTATTACTTGATAAATACGGACACTTGAAACTATCAGATTTTGGATTATGTAAACCGTTAGACTGTAGTACACTTGAAGAATCAGATTTTTCTATTGGTCAGAATGCAAATGGAACTGGACAGAGTGATGATCGTGCAGGTCCGAAGCGTACGCAACAAGAGCAATTGGAAAACTGGCAGAAAAACAGGAGGACCCTTGCTTATTCTACTGTTGGTACACCAGATTATATTGCCCCAGAAGTTCTATTGAAGAAAGGTTATGGGATGGAATGTGATTGGTGGTCACTTGGAGCTATTATGTATGAAATGCTGGTGGGATATCCACCTTTTTATTCTGATGATCCAATGTCAACATGCAGGAAGATAGTAAACTGGAGGTCTCACTTGAAATTTCCTGAAGAAGCAAGGCTATCTCCGGAGGCCATAGATCTTATAAGTCAGCTTTTGTGTAATGTCAGCCACAGACTGGGGTCAAATGGTGCAGTTGAAATAAAGTCTCATCCATTCTTTGAAGGTGTTCAATGGGAAAAGTTGTATCAAATGGAAGCTGCATTTACTCCTGAAGTAAATGATGAGTTAGATACTCAAAATTTTGAAAAGTTTGAAGAGGCTGACTGCCAGACTCATTCCTCATCAAGAGCTGGTCCATGGAGAAAGATATGA 1212 0.3985 MKSLQERKERRTVLEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVEDFEMLTMIGKGAFGEVRVCREKTTDHVFAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDDYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKYGHLKLSDFGLCKPLDCSTLEESDFSIGQNANGTGQSDDRAGPKRTQQEQLENWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRSHLKFPEEARLSPEAIDLISQLLCNVSHRLGSNGAVEIKSHPFFEGVQWEKLYQMEAAFTPEVNDELDTQNFEKFEEADCQTHSSSRAGPWRKI* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1323 403 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 403 - -
Psa3g1323 403 ProSitePatterns Protein kinases ATP-binding region signature. 61 84 IPR017441 GO:0005524
Psa3g1323 403 Gene3D Transferase(Phosphotransferase) domain 1 141 370 - -
Psa3g1323 403 MobiDBLite consensus disorder prediction 384 403 - -
Psa3g1323 403 Pfam Protein kinase domain 56 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g1323 403 Gene3D Phosphorylase Kinase; domain 1 45 140 - -
Psa3g1323 403 MobiDBLite consensus disorder prediction 216 237 - -
Psa3g1323 403 SUPERFAMILY Protein kinase-like (PK-like) 28 395 IPR011009 -
Psa3g1323 403 ProSiteProfiles Protein kinase domain profile. 55 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g1323 403 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 403 - -
Psa3g1323 403 SMART serkin_6 55 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g1323 403 CDD STKc_NDR_like 53 403 - -
Psa3g1323 403 ProSiteProfiles AGC-kinase C-terminal domain profile. 354 403 IPR000961 GO:0004674|GO:0005524|GO:0006468
Psa3g1323 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1323 Psa-Chr3 118979363 118989500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1323 1 403 AGC Kinase Gene Family AT2G20470 81.683 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Psa3g1323 Pkinase 8.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1323 K08790 - gmx:100805940 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1323 3 118979363 118989500 Psa3g1323 3 118979363 118989500 ECH