Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1260 ATGTCAATGAATCACGCAATTGTTGTTGTTGTTGTTACCATACTTGTCCCTGTTCTATATTATTTCTTGAAAACCGTTCACTCAGTTTTCTATCTCCCATACAAAATCCAACGACACTTCCGCAACCAAGGTATATCAGGTCCTAACTACCGTCCGATCTTTGGTAACTCATCTGAGATCAAACGCCTTTACGCACAAACTAAATCAGAAGCGAGTCAGTTTGATCACGACTTCTTAAAACGTGTGGTTCCATTCTACCACAGGTGGTCTTGCATGTATGGGAAAACTTTCCTGTATTGGTTCGGGTCAACTCCCCGGTTGGCTATATCCGACCCGGATATGATCAAGGAAGTGTTGGTTACTAAGTGTGGAGAGTATGGGAAGGTTCCTTATAATCCACTATCCAAGTTGCTTTTTGGACAAGGACTTGTTGGTTTGGAGGGTAATCAATGGAGTTTTCATAGAAGGATAATTAACTTGGCATTCAACGTGGAGATTCTTAAGGGATGGGTGCCAGATATTGTGGAAAGTGTGACAAAGATGCTTCAAAATTGGGAAAATGAAAGAGGAGGAAGAGATGAATTTGAAATAGATGTGCACAGAGAACTTCATGATCTTTCTGCTGATGTTATATCAAGGACTGCTTTTGGCAGCAGTTTTGAAGAGGGAAAGCAAATTTTCAAATTACAGGAGCAGCAGATGCATCTTTTCTCACAGGCAGTTAGAAGTGTCTATATTCCTGGATTTAGATATTTGCCAACTAAGAAGAACCGGGATAGATGGAGACTAGATAAAGAGACGCGTGAATCAATTTGCAAGCTGATTGAGAGCAAGAACAATGCAAGAGAAAATTCCAAAAATGTTCTAAACTCATTAATGAGTTCCTACAAGAATGAAGTTGGTGGAGAAGACAAATTAGGATTGGAAGAAATTATAGATGAATGTAAAACCATATACTTTGCTGGAAAGGATACAACAGCTAACTTATTGACTTGGGCACTTGTTCTTTTAGCAAAACATCAAGAATGGCAAAGTAAGGCGCGTGAAGAAGTTCTCCGTGTAACTGGACACAATCAACCTCCAATTGCAGACAATTTAAATGACCTTAAGATTGTCGGCATGATCATTAGTGAAACACTTCGACTCTATCCTCCAGCTCTAATGTTAATGAGGCAAACCAATGAAAATGTGATGCTAGGGAGCATGGAAGTTCCTGCAAAGACTCAACTCTACTTGGCATTGGCTGCTATTCATCATGACAGAGAAATCTGGGGAGAAGATTGTCACGAGTTTAATCCAATGAGATTTAGCGAACCTCGGAAGCATTTAGCAGCATGGTTTCCATTTGGATTAGGGTCTAGAACTTGTGTTGGGCAAAATTTGGCATTGGTTGAGGCAAAGATAGCTCTTGCTTTGATTATTCAAAGTTATAGTTTTGTGGTATCTCCAAGCTATAAACATGCTCCTATACTGTTTATAACTTTGCAGCCTCAACATGTGCACAAATCATCTTCACAAGGATTTCAGCTTGACTATTGCTATTCCCTTTTTTGTGTAATTCTGAACTTTGTTTGTAGTAACTCTTTTTGGCTATAA 1596 0.3929 MSMNHAIVVVVVTILVPVLYYFLKTVHSVFYLPYKIQRHFRNQGISGPNYRPIFGNSSEIKRLYAQTKSEASQFDHDFLKRVVPFYHRWSCMYGKTFLYWFGSTPRLAISDPDMIKEVLVTKCGEYGKVPYNPLSKLLFGQGLVGLEGNQWSFHRRIINLAFNVEILKGWVPDIVESVTKMLQNWENERGGRDEFEIDVHRELHDLSADVISRTAFGSSFEEGKQIFKLQEQQMHLFSQAVRSVYIPGFRYLPTKKNRDRWRLDKETRESICKLIESKNNARENSKNVLNSLMSSYKNEVGGEDKLGLEEIIDECKTIYFAGKDTTANLLTWALVLLAKHQEWQSKAREEVLRVTGHNQPPIADNLNDLKIVGMIISETLRLYPPALMLMRQTNENVMLGSMEVPAKTQLYLALAAIHHDREIWGEDCHEFNPMRFSEPRKHLAAWFPFGLGSRTCVGQNLALVEAKIALALIIQSYSFVVSPSYKHAPILFITLQPQHVHKSSSQGFQLDYCYSLFCVILNFVCSNSFWL* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1260 531 PANTHER CYTOCHROME P450 FAMILY MEMBER 13 501 - -
Psa3g1260 531 PANTHER CYTOCHROME P450, FAMILY 721, SUBFAMILY A, POLYPEPTIDE 1 13 501 - -
Psa3g1260 531 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1260 531 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1260 531 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1260 531 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1260 531 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1260 531 PRINTS E-class P450 group I signature 114 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1260 531 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1260 531 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1260 531 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1260 531 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1260 531 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1260 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Psa3g1260 531 SUPERFAMILY Cytochrome P450 77 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1260 531 Pfam Cytochrome P450 85 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g1260 531 Gene3D Cytochrome P450 29 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1260 Psa-Chr3 113919021 113921906 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1260 27 499 Cytochrome P450 AT1G75130 55.462 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1260 - - gmx:100775195 785.793