Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1244 ATGCTGCCGTCGGTTATCTTCCTCTTTGCTCTACTTAACTTGCTTTTCTCTTCCCAAGTGGAGTCATTTTCTCTGAGTGTGCCATTTGCTTCATTGGAACAAACTAAATTGTGGTTAGTTAAGCCATCTTATGCACCGTCTTATCCACCTGTGTCATCTCCATCTTACCAAGGTCCTAGTGCAACTCCAAAACACAAACATCATCATCGTCACCAGCGCCATCATAGCATGAGACCTTACGTAGGGGCTCCACCACCTTCCAAAGAGCAAGCTTGCGATCAAATATGTACGGATCCTCTCACATCAACTCCCTTTGGTTCACCTTGTGGTTGTGTATTTCCTATGAAAGTCAAACTTACACTGGATGTAGCTCCTTATGCTGTTTTTCCAGTAATGAATGAGTTAGAGTATGAAGTTGCACTAGGCACATATTTAGAACAGAGTCAGGTGAAGATAATGGGTGCAACTGCTGACGGTCAAAATCAGGGAAGAACTATTGTTGATATAAACTTGGTTCCATTGGGAGAGAAATTTGACAATACAACTGCAGCCCTGACATATGAGAGGTTATGGCATAAAAAAGTTCCTCTAAATAAGAGTCTTTTTGGTGATTATGCTGTCGTGTACATTACATATCCAGGAATTCCATCTTCACCACCATATGGAACTTCAATCGGGAGCGGTCCTAGTGAAAATGCTGATGGTAGTTTGCCAGTCAGCGCCAATTTTGCTAGCAAGAACCAGAAAACAAATCTTAGAACTATAATCATCATTGCTTTGTCTTCGTTTGTTCTCTTGCTGGTTTTGGTTGGAGCATTTTCTGTTACTCTGAAATGGAGGAAGACTAGGAGACCATCAAGTGCAGTTGGCCCAGCATTTACATCTTCCCTGAACAAGAGATCTGGCTTGGGGTCTGTGCTGTCAAGCAGTATTGCGAGCTCGACATCAGTGTCCCTCATGTCTACAATGCCTACTTCCATTCTCTCTGTTAAAACATTTTCACTGTCTGAGATTGAGAAAGCAACACATAAGTTTAACTCAAAGAGAGTATTAGGGGAAGGAGGATTTGGACGTGTATATAGTGGGACATTAGAAGATGGGGCTGAGGTTGCAGTAAAGCTCCTTACAAAGGATAATCAAAATGGAGACCGTGAATTTATTGCAGAAGTTGAAATGTTAAGCCGTTTGCATCATCGCAATCTAGTGAAACTTATTGGTATTTGCATTGAAGGGCGCAGGCGTTGCCTGGTGTATGAGCTAGTTCCTAATGGCAGCGTTGAGTCCCATTTGCATGGTGATGACAAGAATAGGGGACCTCTGGATTGGGAAGCACGGATGAAAATTGCCCTTGGAGCTGCGAGAGGATTGGCTTATCTTCACGAGGATTCCAATCCCCGTGTAATTCATCGGGACTTCAAAGCTAGCAATGTGCTATTAGAAGACGACTTTACCCCTAAAGTTTCTGATTTCGGTTTGGCACGAGAAGCAACTGAAGGAAGTAATCATATTTCTACACGAGTGATGGGGACTTTTGGGTACGTTGCCCCAGAATATGCAATGACAGGCCATTTACTAGTTAAAAGTGATGTTTATAGTTATGGCGTTGTGCTTCTTGAACTTCTCACTGGCAGAAAACCAGTGGATATGTCTCAACCTCAGGGACAGGAGAATCTTGTAACATGGGCGCGGGCACTGTTGACCAGTAGAGAGGGTTTAGAACAGCTAGTGGATCCATCTTTGGCTGGAAGTTACAACTTTGATGACATGGCAAAGGTAGCAGCTATTGCGTCAATGTGTGTTCACTCCGAGGTCACACAGAGACCTTTTATGGGTGAAGTTGTGCAGGCTCTTAAACTGATATACAATGACACAGATGAGACTTGTGGAGATTATTGTAGTCAGAAGGACTCATCTGCTCAGGAATCTGATTTTAGAGGTGAGCTTGCCCCTTCTGATAGCAGTTGGTGGAATGGTGGAGGATTAACACCTCGACTAACTTATGGACAAGCATCTTCCTTCATCACAATGGAATACAGTTCTGGTCCACTGGAAGATATGGAAAACAGACCGTTTTCAACTTCAAGCTTTAATGGAGATGAGATATCTCTACCAATTAGGCATGGGAATAGATCAGGTCCCTTAAGAACGATCCGAAGCAAGTTATCTTTATATAGATTTTCAGGAAGTCGGAGTGAGCATGGGGAGCGTTCTTCTAAGCGAAGTTGGGTATGA 2232 0.4319 MLPSVIFLFALLNLLFSSQVESFSLSVPFASLEQTKLWLVKPSYAPSYPPVSSPSYQGPSATPKHKHHHRHQRHHSMRPYVGAPPPSKEQACDQICTDPLTSTPFGSPCGCVFPMKVKLTLDVAPYAVFPVMNELEYEVALGTYLEQSQVKIMGATADGQNQGRTIVDINLVPLGEKFDNTTAALTYERLWHKKVPLNKSLFGDYAVVYITYPGIPSSPPYGTSIGSGPSENADGSLPVSANFASKNQKTNLRTIIIIALSSFVLLLVLVGAFSVTLKWRKTRRPSSAVGPAFTSSLNKRSGLGSVLSSSIASSTSVSLMSTMPTSILSVKTFSLSEIEKATHKFNSKRVLGEGGFGRVYSGTLEDGAEVAVKLLTKDNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVPNGSVESHLHGDDKNRGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSNHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPQGQENLVTWARALLTSREGLEQLVDPSLAGSYNFDDMAKVAAIASMCVHSEVTQRPFMGEVVQALKLIYNDTDETCGDYCSQKDSSAQESDFRGELAPSDSSWWNGGGLTPRLTYGQASSFITMEYSSGPLEDMENRPFSTSSFNGDEISLPIRHGNRSGPLRTIRSKLSLYRFSGSRSEHGERSSKRSWV* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1244 743 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Psa3g1244 743 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Psa3g1244 743 MobiDBLite consensus disorder prediction 55 79 - -
Psa3g1244 743 SUPERFAMILY Protein kinase-like (PK-like) 322 620 IPR011009 -
Psa3g1244 743 ProSiteProfiles Protein kinase domain profile. 345 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g1244 743 CDD STKc_IRAK 351 620 - -
Psa3g1244 743 Gene3D Transferase(Phosphotransferase) domain 1 421 642 - -
Psa3g1244 743 Pfam Protein tyrosine and serine/threonine kinase 347 617 IPR001245 GO:0004672|GO:0006468
Psa3g1244 743 PANTHER OS01G0750732 PROTEIN 5 742 - -
Psa3g1244 743 MobiDBLite consensus disorder prediction 62 77 - -
Psa3g1244 743 Gene3D Phosphorylase Kinase; domain 1 316 420 - -
Psa3g1244 743 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 5 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1244 Psa-Chr3 112346655 112352154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1244 95 626 Receptor kinase-like Gene Family AT5G56890 60.401 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Psa3g1244 PK_Tyr_Ser-Thr 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1244 - - gmx:100792309 1254.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1244 3 112346655 112352154 Psa3g1244 3 112346655 112352154 ECH