Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1239 ATGGAGAAAGAAATGAAAAAGAGATCCAAAGTCAAAACATTCACTGATTTTGATGCGGATCGTCAAGCGGGCCCTCCGATAGATTTTGCCTGTCATGGATTAGATATTTTGAAAACACTTGGTGTGGAAACTTGTTCAGTGGAAACTGGCCAAGAAGCCTTAGAAATAATTTCTTATGATCGGATCTATGACCTAATTCTGATTCGTAGGATTTTGCCTGTCATGGATGGACTTAAGGTGACGGAGATGCTGCGAAACATGGAGTACCCTACAACGATAATTGGGGTGACGCATCCGCTTACAGAATTAGAAAAGGAAGAATTTTATAGTGCAGGGGTAGATGGTTGCATTGATTATGAGATACCATTGAGAGCTAAAACGGTTGAAACACTGGTTGCAAATATTAATCATCCCCGACCCTGGAAGAAAAGAGTTGAGTATAATGCAGTTTACAATACTTTTTTCCGTCCTGATTCAAAGTTTCGTCCTGGCCAGCTTTATCATTCAAGTTCTGGCCGTGGCTCAGGTTCAAGTTCTGGCCGTGGCTCAGGTTCAAGTTCTGGCCGTGGCTTAGGTTCAAGTTCTGGCCGTGGCTCAGGTTCAAGTTCTGGCCGTGGCTTAGGTTCAAGTTCTGGCCGTGGCTCAGGTTCAAGTTCTGGCCGTGGCTTAGGTTCAAGTTCTGGTCGTGGCTCAGGTTCAAGTGCTGGTCGTGGCTCAGGTTCAAGTTCTTGCAAATAG 738 0.4485 MEKEMKKRSKVKTFTDFDADRQAGPPIDFACHGLDILKTLGVETCSVETGQEALEIISYDRIYDLILIRRILPVMDGLKVTEMLRNMEYPTTIIGVTHPLTELEKEEFYSAGVDGCIDYEIPLRAKTVETLVANINHPRPWKKRVEYNAVYNTFFRPDSKFRPGQLYHSSSGRGSGSSSGRGSGSSSGRGLGSSSGRGSGSSSGRGLGSSSGRGSGSSSGRGLGSSSGRGSGSSAGRGSGSSSCK* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1239 245 Gene3D - 33 145 - -
Psa3g1239 245 PANTHER TWO-COMPONENT RESPONSE REGULATOR 35 136 - -
Psa3g1239 245 SUPERFAMILY CheY-like 35 117 IPR011006 -
Psa3g1239 245 Pfam Response regulator receiver domain 36 118 IPR001789 GO:0000160
Psa3g1239 245 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 35 136 - -
Psa3g1239 245 MobiDBLite consensus disorder prediction 166 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1239 Psa-Chr3 112261151 112263103 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1239 26 135 Response Regulator Gene Family AT3G04280 31.858 1.50e-07 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa3g1239 Response_reg 2e-09 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1239 - K11527 mtr:MTR_7g098860 75.0997