Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1232 ATGACTGTTAGAATTGCAATTGTTAATTGGCTTATCATTGGATTTGTCACTGAATACTATACCGGCGATGCATACAGCCCTGTGCAAGATGTTGCTGATTCCTGCAGGACTGTTTCCGTTTTGCTGCCATGTATGGTTTTGCTGTTTGCGGCACTTGGAATGTTGAATGCTATAGCAACCGGATTAGCCATCGATGCATACGGTCCAATCAGTGACAATGTCGGAGTTGTTACCGAGATGGCTGGAATGAGTCACAAAATTCGTGAAAGAACCGATGCTCTTGATGCTGCAGGAAACACAACTGCTGCCATTGGAAACGGATTTGTTATTGGTGTTGCCGCCCTTGTGTCTTTGGCTCTTTCTGGTGCCTTTGTGATCCTGACAGTGCGGTTTCGAGCTTTGGAGAAGCTCTGA 414 0.4589 MTVRIAIVNWLIIGFVTEYYTGDAYSPVQDVADSCRTVSVLLPCMVLLFAALGMLNAIATGLAIDAYGPISDNVGVVTEMAGMSHKIRERTDALDAAGNTTAAIGNGFVIGVAALVSLALSGAFVILTVRFRALEKL* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1232 137 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 49 126 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa3g1232 137 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 3 39 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa3g1232 137 Pfam Inorganic H+ pyrophosphatase 49 126 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa3g1232 137 PANTHER PYROPHOSPHATE-ENERGISED PROTON PUMP, PYRIDOXAL PHOSPHATE-DEPENDENT TRANSFERASE-RELATED 49 126 - -
Psa3g1232 137 PANTHER PYROPHOSPHATE-ENERGISED PROTON PUMP, PYRIDOXAL PHOSPHATE-DEPENDENT TRANSFERASE-RELATED 3 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1232 Psa-Chr3 111716389 111717007 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1232 11 125 Primary Pumps ATPases AT1G15690 64.138 1.52e-49 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1232 K23025 - osa:4341645 160.614