Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1230 ATGAACCAGTCTTTGGCTTGCATGGAGGGGCACTGCTTGGTATTGCCTATCGGATATCTAGAAGAATCAGTCCAGGAATTTGAGCCAACATTGAAAAATAGCATTGCCGTTTCAACAACACTGATGACTGTTAGAATTGCAATTGTTAATTGGCTTATCATTGGATTTGTCACTGAATACTATACCGGCGATGCATACAGCCCTGTGCAAGATGTTGCTGATTCCTGCAGGACTGTTTCCGTTTTGCTGCCATGTATGGTTTTGCTGTTTGCGGCACTTGGAATGTTGAATACTATAGCAACCGGATTAGCCATCGATGCATACGGTCCAATTAGTGACAATGCCGGAGTTGTTGCCGAGATGGCTGGAATGAGTCACAAAATTCGTGAAAGAACCGATGCTCTTGATGCCGCAGGAAACACAACTGCTGCCATTGGAAAGGGATTTGTTATTGGTGCTGCCGCCCTTGTGTCTTTGGCTCTTTCTGGTGCCTTTGTGATCCTGACAGTGCGGTTTCGAGCTTTGGAGAAGCTCCGAACATTCCTGATATCGTAG 555 0.4577 MNQSLACMEGHCLVLPIGYLEESVQEFEPTLKNSIAVSTTLMTVRIAIVNWLIIGFVTEYYTGDAYSPVQDVADSCRTVSVLLPCMVLLFAALGMLNTIATGLAIDAYGPISDNAGVVAEMAGMSHKIRERTDALDAAGNTTAAIGKGFVIGAAALVSLALSGAFVILTVRFRALEKLRTFLIS* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1230 184 Pfam Inorganic H+ pyrophosphatase 90 168 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa3g1230 184 PANTHER PYROPHOSPHATE-ENERGISED PROTON PUMP, PYRIDOXAL PHOSPHATE-DEPENDENT TRANSFERASE-RELATED 52 80 - -
Psa3g1230 184 PANTHER PYROPHOSPHATE-ENERGISED PROTON PUMP, PYRIDOXAL PHOSPHATE-DEPENDENT TRANSFERASE-RELATED 90 167 - -
Psa3g1230 184 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 90 167 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa3g1230 184 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 52 80 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1230 Psa-Chr3 111695699 111696700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1230 24 166 Primary Pumps ATPases AT1G15690 55.072 3.04e-59 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1230 K23025 - ini:109176472 187.578